Cannabis sativa (hemp): 133031071
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Entry
133031071 CDS
T08987
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Module
csav_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133031071
Enzymes [BR:
csav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133031071
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ZirS_C
DUF7460
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133031071
NCBI-ProteinID:
XP_060960319
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Position
9:complement(58769495..58771786)
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AA seq
404 aa
AA seq
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MAYSNNILMMKMSLFILYPLIMLILLALPTLSTSSFNVLMGFGAKSNGLTDSTEAFLRAW
EATCASTEAALIYVPKGRYLVRPMDFKGPCKSPYITFRIDGTLVAPEDYQVLGDTENWLN
FQRVSGVSIVGGALDARGPALWACKANPDKSCPSGATSLSITYSKDIKITGLLSLNSQMF
HIVINHCENVEMRGVRIIAHGDSPNTDGIHVQLSKNVAIYNSAVGTGDDCVSIGPGTQNL
WIERMACGPGHGISIGSLAKDIDEEGVQNVTVKQAVFTGTQNGIRIKSWAKPSKGFVEGV
HFSNIVMKNVQNPIIIDQNYCPSHVNCPTHVTGIKINDITYKNIKGTSATTIATKFDCSS
GNPCSGIRLEDVNLTFQNKPAHSLCANAKGISFGTVLPDSCLLN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttattccaataacattttgatgatgaagatgagtttgttcattttatacccacta
atcatgttgatattgttagctcttccaacattatcaacttcatctttcaatgttttgatg
gggtttggggcaaaatccaatggcctaactgactctaccgaagcattcctacgtgcatgg
gaagctacgtgtgcctctacagaagcggccctcatatacgttcccaagggtaggtatttg
gttcgcccaatggacttcaagggtccatgcaaaagcccatacataacctttcgtattgat
ggtacccttgtcgccccagaggactatcaagtgttgggtgatactgagaattggcttaac
ttccaaagagttagcggtgtttctattgttggtggtgcacttgatgctagaggccctgcc
ttgtgggcttgtaaggccaatcctgacaagtcatgtccctccggagcaacgagtttgagc
attacgtactctaaagacataaaaatcactggattattgtcgttgaacagccaaatgttt
cacattgtaataaaccattgtgaaaatgttgagatgagaggagtgagaatcattgctcac
ggtgacagtcccaacaccgatggcatccacgttcaactctccaaaaatgttgccatctac
aactctgcagtaggaactggggacgattgtgtttccatcggccccggaactcagaatctc
tggatcgaacgcatggcgtgtggtcctggtcatggcattagcatcggaagcctagccaag
gacatagatgaggaaggagtccaaaatgtgacagtgaaacaagctgtttttacaggtact
caaaatgggattagaatcaaatcatgggcgaaacctagcaaaggctttgttgagggtgtt
catttctcaaatatcgtcatgaaaaatgttcaaaatccaatcataattgaccaaaactat
tgcccaagccatgttaattgtccaactcatgtgactggcataaagatcaatgacataact
tacaaaaacataaaagggacatctgcaacaacaatagcaacaaagtttgattgtagctct
ggaaatccatgcagtgggattagattggaagatgtgaacttgactttccaaaacaaacca
gctcattctctttgtgccaatgctaagggaatatcttttggcactgttttacctgatagt
tgtctattaaattaa
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