Cannabis sativa (hemp): 133032395
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Entry
133032395 CDS
T08987
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133032395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
133032395
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133032395
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133032395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
133032395
NCBI-ProteinID:
XP_060962307
LinkDB
All DBs
Position
X:80664039..80664696
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AA seq
142 aa
AA seq
DB search
MSILSKGDSIHIREVWNDNLDEEFALIRDIVDRFNYIAMDTEFPNIVLRPVGNFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFDISEDVFASDSIEF
TTWCVSEIKLASDRITFCYGIL
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctatcgaaaggtgattctattcacatcagagaagtatggaatgataatctt
gacgaagagtttgcattaattcgtgatattgttgatcggttcaattatattgctatggac
actgagtttcccaatattgtacttcgccctgtgggaaatttcaagaacattaatgactat
aattaccagactctgaaagacaatgttgatatgttgaaattgattcaattgggtctcaca
ttctctgacgaggatgggaaccttccaacttgcggaactgataagttttgcatttggcaa
ttcaattttcgtgagttcgacataagcgaagatgtctttgctagtgattcgattgagttc
actacttggtgtgtttcagagatcaaattagcaagtgacagaattacattttgctacggc
atactgtga
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