KEGG   Cannabis sativa (hemp): 133033064
Entry
133033064         CDS       T08987                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    133033064
Spliceosome [BR:csav03041]
 Complex B
  Other components
   Complex B specific factors
    133033064
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_SCAP VPS8_N Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd zf_topless DUF7165 Beta-prop_IP5PC_F RMC1_N Baculo_RING Mala_s_1-like
Other DBs
NCBI-GeneID: 133033064
NCBI-ProteinID: XP_060963605
LinkDB
Position
Unknown
AA seq 524 aa
MSSLEIEAIDVIKIVLQFCKENSLHQTFQTLENECQICLNTVDNMETFVGDINNGRWDVI
LPQIAQLKLPKNKLEDLYEQIVLEMIEVGELDTARAILRQTQVMGCVMKQEQLERYLRLE
RLLVTTYFDPNKAYQESTKEKRRAEIGEALAAEVSVVPPSRLMALIGQSLKWQQHQGLVP
PDTHKFDLFRGTAAMKQEEQDTFSFPSSTLAHTIKFGTKSHAECARFSPDGQFLVSSSVD
GFVEVWDCVSGKLNKDLQYQADETFMMHDDPVLCVNFSRDSEVLASGSQDGKIKVWRIRS
GQCLRRLERAHSHGVTSVFFCRDGTQLLSTSFDGTARIHGIKSGKLLKEFRGHGSYVNDA
IFTHHGARVVTASSDSTLKVWDVKTTQCLHTFKPPPPLRGGDDACVNSLHLFPKTSSNSD
QHIIVCNKTSCVYIMTLQGQVVKSFSSGKREGGDFVGACVSPKGEWIYCVGEDRNVYCFS
YQSGKLEHLIMKAHDKDVIGIAHHPHRNLVATYAEDCTIKLWKP
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgtctagtctagaaatcgaagctatagatgtgatcaaaattgtgcttcaattttgtaaa
gaaaattcattgcaccaaacatttcagacacttgagaatgagtgtcaaatatgtttgaac
acagtagataacatggaaacatttgttggtgatattaataatggaagatgggatgtgata
ctccctcaaattgctcaactcaaacttccaaagaataaattggaggacttgtacgagcag
attgtcctcgaaatgattgaggttggtgaattggataccgctcgtgctatcttaagacag
actcaggtaatgggttgtgtgatgaagcaagaacaactcgaaagatacttgaggctcgaa
cgtctgttggtgacaacatattttgatccgaacaaggcttatcaagagtcaaccaaagag
aaaagaagagctgaaattggtgaagcacttgcagcagaggttagtgttgtaccaccttca
aggctaatggctcttattggtcagtctttgaagtggcaacaacaccaaggattggttccc
ccagacacacacaaatttgacttatttagaggaacagctgctatgaaacaagaagaacaa
gacacattttcattcccatcctcaactcttgcacataccataaagtttggcacaaaaagt
catgctgaatgtgctcgtttttcccctgatggacagtttcttgtttcctcctctgttgat
ggatttgttgaggtttgggattgtgttagtgggaaattgaacaaggatttacagtatcag
gctgatgaaactttcatgatgcatgatgatccagtgttgtgtgtgaatttcagtagggat
tcggaggttcttgcgtctggatcacaagatgggaagatcaaagtttggcgcataagaagt
ggtcagtgcttgcgccgtcttgaacgcgcacattctcatggcgtcaccagtgttttcttc
tgtcgtgatggaacgcagttgctgagtacatcgtttgatggcacagcaaggattcatggt
attaaatctggcaagttgttaaaggaattccgaggccatggatcttatgtaaatgatgca
atctttacacaccatggagctcgcgttgttacagcctctagtgattcgacgcttaaagtg
tgggatgtgaagactacgcaatgtctacacaccttcaaaccgcctcctcctctaagggga
ggcgatgatgcctgtgtcaattctcttcaccttttccccaaaactagttctaatagcgac
caacacatcattgtatgtaataagacgtcgtgtgtatacatcatgacacttcaaggacag
gttgtaaagagcttttcatcaggtaaaagggaaggtggagattttgtgggagcttgtgtg
tcacctaaaggggaatggatttactgtgttggtgaagataggaatgtctactgcttcagc
tatcaatctggtaaactagagcacctaataatgaaggctcatgacaaagatgtaattggt
atagctcatcaccctcatagaaatttggtggccacatatgctgaggactgcacaatcaaa
ctatggaagccttaa

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