Candidatus Chlamydia sanziniae: Cs308_0238
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Entry
Cs308_0238 CDS
T10171
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
csaz Candidatus Chlamydia sanziniae
Pathway
csaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cs308_0238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaz03021
]
Cs308_0238
03019 Messenger RNA biogenesis [BR:
csaz03019
]
Cs308_0238
Transcription machinery [BR:
csaz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Cs308_0238
Messenger RNA biogenesis [BR:
csaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cs308_0238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
S1CSD-TOTE-2
OB_RNB
AAA
Spore_III_AA
Mor
DUF5855
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANH78409
UniProt:
A0A1A9HTU0
LinkDB
All DBs
Position
complement(260835..262229)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEILPKVKETKKHTYPLLEEKSFVGECAVVSAESEETPSVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERADELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKDNFAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMYLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagcgttcttcagaaatcttgccgaaggtgaaagaaacgaaaaaacataca
tatcctttgctagaagagaagtcttttgtaggagaatgtgccgtagtgagcgcggagtca
gaagaaactccatccgtgacaattacgaaaattgcaaaactgcaaaggatgggaattgag
gagctaaacgtattggctcgccaatacggcgtgaagaacatcgggtcgttaacaaaatct
caagtggttttcgaaattgttaaagctaaatcagaacgagcagacgaactccttataggg
gaaggcgttttggaagttctccccgatggttttggttttttgcgatctcctacatacaac
tatttgccatcagcagaagatatttacgtttctccggcacaaattcgtcgatttgattta
aaaaaaggcgataccattatcggaactatacgttcccctaaggaaaaggaaaaatatttt
gctttattgaaagtagataaaatcaatggttcgactcctgataaagcaaaagaacgtgtg
ttgttcgaaaacctaacccctctataccctaatgaaagaatcgttatggaaatggggaaa
gataattttgctgaaagagtcttagatttgaccgctcccataggtaaagggcagagaggt
cttattgttgctcccccacgttctgggaaaacggtcattttgcaaagtatagcccatgct
attgctgtcaataatcccgatattgttcttattgtactgctcatcgacgaaagacccgaa
gaagtcacagatatgattcgtcaagtgcgaggtgaagttgttgcctcaacatttgatgaa
cagcctgaacgccatatccaagttgcggaaatggtaatagaaaaagcacgtcgtttagta
gaacatggcaatgacgtcgttatcttgctcgactctattacaagattagcgcgtgcttat
aacactgtccagcctcactcaggtaaaattttgaccggaggtgtagatgcaagcgctttg
cataaacctaaacggttttttggagcagcaagaaatatagaaggcggaggatctctaaca
attttagcaactgccttaattgataccggctcacgtatggacgaagtgatctttgaagaa
ttcaaaggtacaggaaatatggaattagttcttgatcggcgtctttcagacagaaggacc
tatcccgccattgatttaattaagagtggtaccagaaaagaagaacttctttaccaccca
agtgaattggaaaaagtctatctcttccgtcaagcaatagcagatctcacagctattgat
gctatgtatcttctgttaggcaggttgaaaaagacaaatagtaatgcagaatttctactc
tcccttaaagaataa
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