Candidatus Chlamydia sanziniae: Cs308_0256
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Entry
Cs308_0256 CDS
T10171
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csaz Candidatus Chlamydia sanziniae
Pathway
csaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cs308_0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaz03021
]
Cs308_0256
03400 DNA repair and recombination proteins [BR:
csaz03400
]
Cs308_0256
Enzymes [BR:
csaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cs308_0256
Transcription machinery [BR:
csaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cs308_0256
DNA repair and recombination proteins [BR:
csaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cs308_0256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ANH78427
UniProt:
A0A1A9HUP5
LinkDB
All DBs
Position
complement(281098..282222)
Genome browser
AA seq
374 aa
AA seq
DB search
MSDNSQNLLYDKFELPDTVKVFPVEGFPIDKYARFIAEPLERGMGHTLGNALRRALLIGL
EAPAIISFTMTGVLHEYMAMDGIVEDVTNIVLNLKGALLKKYPMQDTSLGRSTQIIKTQI
SIDASDLAAAQGQKSVTLADLLQQGDFEAVNPNQVMFTVTKPLQSEVLLRIAFGRGYTPS
ERIILEDKGVYEIVLDAAFSPVTLVNYFVEDTRVGQDTDFDRLVLYVETDGRVSPKEALA
FSTQILTKHFSIFENMDEKKIVFEEAVSIEKENKDDILHKLILGINEIELSVRSTNCLSN
ANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLAQFGVGLDNVKEKM
KWYAEKIRTKNTKG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataactcacaaaatttactttacgataagtttgaattaccagatacagttaag
gtctttcctgtcgaaggtttcccaatagataagtatgcacgctttattgctgagcctttg
gagcggggcatgggccataccttggggaatgccttgcgacgtgcattgcttattgggctg
gaagcccctgcaattatctcatttactatgactggggttttgcatgagtatatggcaatg
gatggtattgtcgaagatgtcacaaatattgttcttaatttaaaaggtgccctactaaag
aagtaccctatgcaagatacttctttagggcgatctacgcagataataaaaactcaaatt
tctatagatgcttctgatttggcggcagcacagggtcaaaaatcagttactttggcagat
ttattgcaacaaggagactttgaagcagtaaatccaaatcaagttatgtttactgtaact
aagccactacaatctgaagtgcttttacgcatagccttcggtagaggctacactccttca
gaaaggattattcttgaagataaaggtgtatacgaaattgttttagatgcagctttttct
cctgtgactttggtgaattattttgtagaagatacacgtgtaggtcaggatactgacttt
gaccgtttagtcttatacgtagaaactgatgggcgcgtatctcctaaagaagcgttagct
ttttccacacagattttaactaagcatttttctatttttgaaaatatggatgaaaagaaa
atagtgtttgaagaagctgtttctattgaaaaagaaaataaagacgacattcttcataag
cttattttgggaattaacgaaattgagttatctgtacgatcaacaaattgtttgtctaat
gcaaatattgaaactatcggagagctagtcattatgccagaacctagattgttgcaattt
aggaactttggcaaaaaatctctgtgtgaaattaagaataaattaaaagaaatgaaactt
gagttggggatggatcttgctcagtttggtgtgggattagacaatgtgaaagagaagatg
aaatggtatgctgaaaaaattcgaactaaaaataccaaaggatag
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