Clostridium saccharobutylicum: CLSA_c00230
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Entry
CLSA_c00230 CDS
T02876
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c00230 (addB)
Enzymes [BR:
csb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSA_c00230 (addB)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLSA_c00230 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6730
Motif
Other DBs
NCBI-ProteinID:
AGX41097
UniProt:
U5MNU2
LinkDB
All DBs
Position
21121..24621
Genome browser
AA seq
1166 aa
AA seq
DB search
MSIRFIYGRAGTGKSEFCINEIKKKIEKSEDYKLILLVPEQYTFNTENKILKSIGEIALL
RTEVLSFKRMAHTVFEECGGRVKEIIKESGKNMLIHKVLNENIDSLEYFKKISREQGFNE
IIADIISEFKKYNVNIENLVEIDKSINDIELVQKIKELAVIYDAFNLKMNQGYIDSDDEL
TLLGKKLLNSNIYKDCEVWIDEFTSFTPQQLEIIRLLAKRCRRINITLCMESSFMQKEDE
DITDVFNSIKKTEMSIMKIVEENNIAYDKPIDLNTNFPYRFKNSYELRHIEKYFFTYPFN
SYKGLNKNVSLYKANNIYDEIERVAKSIVKLVRDNGYRYKDISVVCRNIDDYEKITSVIF
KEYNIPYFLDKKLQLLNNPLIILITSAFEILFKNWSYESIFKYLKSGLTGIESLDIDILE
NFILENGVKGYKWTVKEIISEKWFHNNKELTEEQVGIAEIMEEIRRPLITFHNKINGNHT
VRDICAAIYEFLVDLKAFKRIELWIENFEKLGLEDKVKEYSQVEGIVIDILDQAVDVMGG
EILDSFEFFKILNSGFTNQEIGVIPVALDQVNIGDVARIKGRDVKVLYIVGVNDGVLPAA
NKDEGILSDMDRETLSKMGITLASTTRNKIFEEQFLLYTALTISSEYLMISYPMADFEGK
SLRPSIVISRIKKILPNLIEESSIFDLVSNSNMLNKITTPIPTFNELILAVRRDFDKEDI
EEYWPEVYNWFKQNEEFKDKIQNIFNGLNYSNIGDVVAKKKLRELYQNDIGKMVFSVSRL
EKYAKCPFSYFVQYGLKAKNRKVYEFTPPDLGSFVHDVLDSFTNKVKHEGILWSDLNNEK
CREMVSKLIDKRLDEESNSILNSTKRFKYLAQRFKRVISKSITIIAEQINQGKFEVFKTE
FDFGSYSQGEAITLDLNSNEKIYLQGRIDRIDTLDLDDETYVRIIDYKTGAKQFELNELY
HGLQMQLLVYLDALIKNSKYILEKQVKPGGIFYFKIDDPIIKGKKEMTVEEVEVEVLDAL
KMKGLVLKDARVVRAMDKDIDGYSLIIPAAFKKDGDFKANSDVVTEEEFNLLRDYVNKKM
IELCKEMLSGEVKIQPVKQSNRVQCEYCDFSAICQFDTDIKDNKYNVIIKKSQNEIWSDI
KKEIVCTNSFSEKNSNKDSKENNVLE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagatttatatatggtagggctgggactgggaaaagtgaattttgcataaat
gaaataaagaaaaaaatcgaaaaaagtgaggattataagttaattttattagttccagag
caatatacattcaatactgaaaataagattttaaaaagtattggtgaaatagctctttta
agaaccgaagttttgagttttaagaggatggctcacacagtatttgaagaatgtggcgga
cgtgttaaagagataataaaagaatcaggaaaaaacatgttgattcataaagtattaaat
gaaaatattgattctttagaatactttaaaaaaatatcaagagaacagggttttaatgaa
attatagcagatattatttcggaatttaaaaagtataatgttaatattgaaaatttagta
gaaatagataaaagtattaatgatatagaattagtgcaaaaaattaaggaattagcagta
atttatgatgcttttaatttgaagatgaatcaaggatatattgatagtgatgatgaatta
actttattaggaaaaaagttattaaatagcaatatttataaagattgtgaagtatggata
gacgaatttactagtttcacacctcaacaattagagattataagattattggcaaaaagg
tgcagaagaataaatataactctttgtatggaaagttcatttatgcaaaaagaggatgaa
gatataacagatgtttttaattcaataaagaaaactgaaatgagtataatgaaaatagtg
gaagaaaataatatagcttatgataagcctattgatttaaatactaattttccatataga
ttcaaaaatagttatgaattaagacatatagaaaaatacttttttacttatccgtttaat
tcatataaggggttaaataaaaatgtttcactttataaagcaaataatatatatgatgag
attgagagagttgcgaaaagcatagttaaacttgtaagagataatgggtatagatataag
gatatatcagttgtctgtagaaatattgatgattatgagaaaataacatcagtaatattt
aaggagtacaatataccgtattttttagataagaagcttcaattattaaataatccgtta
attatacttataacatctgcttttgaaatcttgtttaagaattggtcttatgaaagtata
tttaagtatttaaaaagtgggttaacaggaatagaaagtttagatattgatatattagaa
aactttatattggaaaatggagtgaagggatataagtggactgtaaaagaaataatttct
gaaaaatggtttcacaataataaagaattaacagaagagcaagtgggaatagctgaaatt
atggaggagataagaagaccacttataacttttcataataaaataaatggaaatcatact
gtaagggatatttgtgctgctatttatgaatttttagttgatttaaaagcgttcaaaaga
atagaattatggattgagaattttgaaaagcttggattagaagataaggttaaggaatat
agtcaagttgaaggcatagtaatagatattttagatcaagcagttgatgtaatgggagga
gagattttagattcttttgaattttttaagatattaaattcaggattcactaatcaagaa
attggagttataccagtagctttagatcaagtaaatattggtgatgtggcgagaataaaa
gggagagatgtaaaagtactttacatagttggagttaatgatggtgtgctgcctgcagcc
aacaaggatgaaggaatattatctgatatggatagagaaacattaagtaaaatgggaata
actttagcatcaacaactagaaataaaatatttgaggaacaatttttactatatactgca
ttaactataagcagtgaatatttaatgatatcttatccaatggctgattttgaaggtaaa
tcattgagaccttcaatagtgatatcaagaatcaagaagatacttcctaatttaatagag
gagagttcaatatttgatttagtaagtaattcaaatatgctaaataaaattacaacacca
attcctacatttaatgagttaatattagcggtgagaagagattttgataaggaagacata
gaagagtattggccagaagtatataactggtttaaacaaaatgaagaatttaaggataaa
atacaaaatatatttaatgggcttaactattctaatataggagatgtagtagctaaaaag
aagcttagagaactttatcaaaatgatattggaaaaatggtatttagtgtatctagatta
gaaaaatatgcgaaatgcccattttcttattttgtccaatatggacttaaagctaaaaat
agaaaagtatatgaatttacacctccagatctaggctcatttgttcatgatgttttggat
tcatttacaaataaagttaagcatgaaggaattttatggtctgacttaaataatgaaaag
tgcagagaaatggtttctaagttaattgataaaagattagacgaagaaagtaattcaata
ttgaatagtactaagagatttaaatatttagctcaaaggtttaagcgagtgatttctaag
tctattacaattatagcagagcaaataaatcaaggtaagtttgaagtattcaagactgaa
tttgattttggcagctatagtcaaggtgaagcaataacattagatttaaattctaatgaa
aaaatatacctgcaaggaagaattgataggatagatacattagatttagatgatgaaact
tatgtaagaattatagattacaagacaggtgctaagcagtttgagttaaatgaattgtat
catggtttacaaatgcagttactagtttatttagatgctttaattaagaattctaaatat
atattagagaagcaggttaaaccaggaggaatattttatttcaaaatagatgatccaata
attaagggcaagaaagaaatgacagtagaagaggttgaagtagaagttttagatgcattg
aaaatgaagggcttggtattaaaggatgccagagttgttagggctatggataaggatatt
gatggttattcattgataataccagctgcatttaagaaagatggagattttaaagctaat
agtgatgtagtaacagaagaagagtttaatttgcttagggattatgtaaacaaaaaaatg
attgaattatgtaaagaaatgttaagtggagaagtcaaaatacaacctgtaaagcagtcg
aatagagtccaatgtgaatattgtgatttctctgcaatatgtcaatttgatactgatata
aaagataataagtataacgtgataataaagaaatctcaaaatgaaatttggagtgatata
aaaaaggagatagtctgtaccaatagttttagtgagaaaaatagtaataaggattcaaaa
gaaaataatgtattagaataa
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