Clostridium saccharobutylicum: CLSA_c01140
Help
Entry
CLSA_c01140 CDS
T02876
Symbol
lagD1
Name
(GenBank) lactococcin-G-processing and transport ATP-binding protein LagD
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
csb
Clostridium saccharobutylicum
Pathway
csb02010
ABC transporters
csb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLSA_c01140 (lagD1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLSA_c01140 (lagD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csb01002
]
CLSA_c01140 (lagD1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csb02000
]
CLSA_c01140 (lagD1)
Peptidases and inhibitors [BR:
csb01002
]
Cysteine peptidases
Family C39
CLSA_c01140 (lagD1)
Transporters [BR:
csb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CLSA_c01140 (lagD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
nSTAND3
SMC_N
AAA_22
GTP_EFTU_D2
RsgA_GTPase
Sigma54_activat
AAA_29
AAA_18
TsaE
Peptidase_C39_2
NPM1-C
Motif
Other DBs
NCBI-ProteinID:
AGX41187
UniProt:
U5MP19
LinkDB
All DBs
Position
138288..140480
Genome browser
AA seq
730 aa
AA seq
DB search
MNIFKKYYCIKQHDMKDCGPACIATILKQYGLKMPVSKIREVSGTDLEGTSVYGLVQAAK
KLGFSCKAVRVVKKEEIFDNLPLPLIAHVIIDNMLLHYVVIHKISKKYILVADPAKGIIK
YTPEEFFKIWSDILILMIPTATFKKGDETKGIFQRFWGLIKVQKGLLINIFISSLLITIL
GMAGSFYFQFLIDDILPNNLSKDLFSISIAMLVLIIFKIITEFFRSILLIYMAQNIDIPL
LLGYYKHVIRLPMNFFSTRKVGEIISRFNDGGKIRDAISSATITLMIDVVMALAGGIVLY
IQNSKLFLSCLIPIILYLILILSFKNKLKKINRRVMEDDATLTSYLVESLEGIETIKSFN
GENLVEVKTENKFLKLMKSCFKHGYIHNLQGTLKSVISSIFGICLLWFGGSLVLKGEITI
GELISFNALLAYFIQPIERLINLQPQLQEAMVASDRLGEILDLELEKSINEKIKPKSLIG
DIILKHVNFQYGVRDKVLNDISMNIKKGDKIAFVGESGSGKTTIAKLLMGFYKLEDGEII
INNYNIKDIDKKVLRDKVGYISQDSFFFSGTIRENLEFADKDITYEDMICACEKAQIHEY
IENLPLRYETILEEKGMNLSCGQRQRLSIARALLKKPEILIMDEATSNLDSITEKAIQKT
LEECSGNLTTIMIAHRLSTIMKCNMIYVIDKGKIVEAGTHKELLEKEGYYYNLWSVQSID
KSDKILVDNI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatttaaaaaatattattgcataaaacaacatgatatgaaagattgtggacca
gcatgcatagctacgattttaaaacaatatggcttaaagatgccagtatcaaaaataagg
gaagtatcaggaacagatttagaaggcacctcagtttatggactggtacaagcagcaaaa
aaactaggatttagttgcaaagcagtaagggtagtaaaaaaagaagagatatttgataac
ttacccctacctttaatagcacatgttattatagataatatgttattgcattatgtagta
atacataagatttctaagaaatatattttagtggcagatcccgctaaaggtattattaaa
tatacaccagaggaattttttaaaatatggagtgatatattaattttaatgattcctaca
gccacgtttaaaaagggagatgaaactaaagggatttttcaaagattttggggattaata
aaagttcaaaagggcttattaataaatatatttatatcatctttattaataacaatatta
ggcatggctggatcattttattttcagtttttaatagatgatatactacccaataattta
agtaaggatttgttttcaatctcgatagcaatgctagtactaattatttttaaaattata
acagaattttttagaagtattttacttatttatatggctcaaaatatagatattccacta
ttgttaggttattataaacatgtaataagattacctatgaacttttttagtacaagaaaa
gtgggagagattatttcgagatttaatgatggtggtaaaataagagatgcaatttcatcg
gcaactataactttaatgattgatgttgtaatggcattagctggagggatagtcttatat
attcaaaattcaaagctatttcttagctgtttaattccgataattttatatttaattttg
atattgagctttaaaaataaattaaaaaaaatcaatagaagggttatggaagatgatgcg
acattaacgtcctatttagtagaatcgttagaaggaatagaaacaataaaatcttttaat
ggtgaaaatttggtggaagtaaagacagagaataagtttttaaagcttatgaagagttgc
ttcaaacatggatatattcataatcttcaagggacattaaagagtgtgataagtagtata
tttggtatatgtttattatggtttggaggtagtttagttttaaaaggcgagataactatc
ggagaattaataagttttaatgcattacttgcatattttattcaaccaatagaaaggtta
ataaatttgcaaccacaattgcaagaagcaatggttgctagtgacagattaggagaaata
ttggacttagagttggaaaagtcaataaatgaaaaaataaaacctaaatcattaattggt
gatataattttaaaacatgtaaactttcaatatggagttagagataaagttttaaatgat
ataagcatgaatataaaaaaaggagataaaatagcattcgttggggaaagtggttcagga
aaaacaacaattgcaaaacttttaatgggattttataaattagaagatggagaaataatt
ataaataattataatataaaagacatagataaaaaagtattgagagataaggttggttat
atatcccaggattcatttttcttttctggaaccataagagagaatttggaatttgctgat
aaggatataacttatgaagatatgatttgtgcttgtgagaaggcacaaatacatgagtat
atagaaaatttacctttaagatatgaaacaattttagaagaaaagggaatgaatttatct
tgtgggcaaagacaaagattatcaatagctagagctttattaaaaaaaccagaaatatta
ataatggatgaagcaacatctaatcttgactccatcacagaaaaagcaatacaaaagacg
ttggaagaatgctcgggaaatttaactacaataatgatagcgcataggttaagtacaatt
atgaaatgcaatatgatatatgttatagataaaggaaagatagtagaagctggtacgcac
aaagaattattagagaaagaaggctattattacaacttatggagtgttcaaagtattgat
aaatcagataaaatacttgtagataatatatga
DBGET
integrated database retrieval system
