Clostridium saccharobutylicum: CLSA_c03660
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Entry
CLSA_c03660 CDS
T02876
Symbol
groS
Name
(GenBank) 10 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLSA_c03660 (groS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csb03019
]
CLSA_c03660 (groS)
03110 Chaperones and folding catalysts [BR:
csb03110
]
CLSA_c03660 (groS)
03029 Mitochondrial biogenesis [BR:
csb03029
]
CLSA_c03660 (groS)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csb04147
]
CLSA_c03660 (groS)
Enzymes [BR:
csb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLSA_c03660 (groS)
Messenger RNA biogenesis [BR:
csb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLSA_c03660 (groS)
Chaperones and folding catalysts [BR:
csb03110
]
Heat shock proteins
HSP60 / Chaperonin
CLSA_c03660 (groS)
Mitochondrial biogenesis [BR:
csb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLSA_c03660 (groS)
Exosome [BR:
csb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLSA_c03660 (groS)
Exosomal proteins of other body fluids (saliva and urine)
CLSA_c03660 (groS)
Exosomal proteins of breast cancer cells
CLSA_c03660 (groS)
Exosomal proteins of colorectal cancer cells
CLSA_c03660 (groS)
Exosomal proteins of bladder cancer cells
CLSA_c03660 (groS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGX41416
UniProt:
U5MP43
LinkDB
All DBs
Position
389074..390702
Genome browser
AA seq
542 aa
AA seq
DB search
MAKMLKFGEDARRNMQIGVDKLADTVKVTLGPKGRNVVLDKKFGAPLITNDGVSIAREIE
LEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPILIRTGIR
MAVDKAVEEIKKISKNIEGKEDIARVAAISAADEEVGKLIADAMEKVGNEGVITIEESKS
MGTELDVVEGMQFDRGYVSPYMATDTEKMEAILENPYILITDKKITNIQEILPVLEQIVQ
AGKKLLIIAEDIEGEAMATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGTVIA
EELGRDLKEVTIDMLGTADSVKVTKENTVIVNGKGESAQIKERVNQIKAQVEETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKEKKLRIEDALNATKAAVEEGIVAGGGTAYVNV
INEVAKLTSDVPDTQIGINIIVKALEEPVRQIATNAGVEGSVIIEKVKNSEAGVGYDALH
GEYINMIKGGIVDPTKVTRSALQNAASVSSTFLTTEAAVVDIPAKESGMPAGAPGMGMDG
MY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgttaaaattcggagaagacgcaagaagaaatatgcaaattggcgtagat
aaattagcagatacagttaaggttactttaggacctaaaggtagaaatgttgtattagat
aagaaatttggggcaccattaatcacaaatgatggagtgtctattgcaagagaaatagaa
ttagaagatccatatgaaaacatgggagctcaattagttaaagaagttgcaacaaaaact
aatgatgtagctggagacggtactacaacagctactttacttgctcaagcaattataaga
gaagggttaaaaaatgtaactgctggagctaatccaatattaattagaactggtattagg
atggctgtagataaggcagttgaagaaattaagaagatttctaaaaacatagaaggaaaa
gaagatatagctagagttgctgcaatctcagctgcagatgaagaagtaggtaagttgata
gcagacgctatggaaaaagtaggtaatgaaggcgttataactatagaagaatctaaatca
atgggaactgaattagatgttgttgaaggtatgcaatttgacagaggatatgtatcacct
tacatggctactgatacagaaaaaatggaagctattttagaaaatccatacattttaatt
actgataaaaagattacaaatattcaagaaatattaccagtacttgaacaaatagttcaa
gcaggtaagaagctattaataattgctgaagacattgaaggagaagcaatggctacatta
gtagttaataaattaagaggaacatttacttgtgttgctgtaaaggctccaggttttggc
gatagaagaaaagaaatgttacaagatatagctatattaactggtggtactgttatagca
gaagaactaggaagagatttaaaagaagttactatagatatgttgggtacagctgatagc
gttaaagtaactaaagaaaatacagttatagttaatggtaagggtgaatcagcacaaatt
aaagaaagagttaaccaaattaaagctcaagttgaagaaacaacttcagaatttgataaa
gaaaaattacaagaaagattagcaaaacttgctggtggagttgcagtaatcaaagttggt
gcagcaactgaaactgaattaaaagaaaagaaacttagaattgaagatgctcttaatgca
acaaaagcagctgttgaagaaggtatagttgctggtggtggaactgcatatgttaatgtt
attaatgaagttgcaaaattaacttcagatgttccagatactcaaattggtattaatata
atcgttaaagcattagaagaaccggttagacaaattgcaactaatgcaggagttgaagga
tcagtaataatagaaaaagttaagaatagtgaagcaggagttggatatgatgctttacat
ggtgaatatattaacatgataaagggtggaatagttgatccaactaaggttacaagatca
gcacttcaaaatgctgcatcagtatcatcaacattcttaacaactgaagcagcagttgtt
gatattcctgcaaaggaatctggaatgccagcaggggctccaggaatgggcatggatgga
atgtactaa
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