Clostridium saccharobutylicum: CLSA_c03810
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Entry
CLSA_c03810 CDS
T02876
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03420
Nucleotide excision repair
csb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSA_c03810 (pcrA)
03430 Mismatch repair
CLSA_c03810 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c03810 (pcrA)
Enzymes [BR:
csb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSA_c03810 (pcrA)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSA_c03810 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CLSA_c03810 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
ResIII
DUF5604
DEAD
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AGX41431
UniProt:
U5MP56
LinkDB
All DBs
Position
409741..412032
Genome browser
AA seq
763 aa
AA seq
DB search
MDLKSLLNKEQYEGATTVDGQVLILAGAGSGKTRVLTHRMAYMIEDLGIAPYKILAITFT
NKAAKEMKDRVKALIGEKAENMWISTFHSTCVRILRREIDKIGYKSNFTIYDTSDQKTLV
KECMKSISINEKDITEQEIMGKISKAKDRMQTARSFKLENESNFRENKIADVYEMYQKRL
KENNALDFDDLIFKTVELFKSNPEVLEFYQNKFQYIMVDEYQDTNAVQYELVRLLADRYK
NICVVGDDDQCIYQWRGADIQNILDFEKDYPGAKVIKLEQNYRSKANILNAANVVIVNNA
NRKSKVLRTEQEEGSKIKIYRAYSDGDEGDFVGKQIVDIKKEQEKHYSDFAVLYRTNAQS
RIFEESFRRKGIPYKIVGGTRFYDRKEIKDILAYLKVIVNLQDDVSIRRIINVPKRSIGD
ATVNKIQEFATDFELNMWDALSEVRSISTLTPRNVSSIEPFVQLMDNFMVLSETVPVSVL
IETILEDTGYMEVLKKSNEIEDKSRIENLKELVSDAVDFEKSSEDKSLAAYLEKVSLVQD
TDKIEEEDDMVVLMTVHSAKGLEFPVVFMVGMENGIFPGTASFEKESEMEESRRLCYVGI
TRAKETLFMTSAEVRRVFGKTVAYPQSDFINEIKPSLKEYVANDKANIKSREGFAQKSSY
NNPHSLRNNLRGNATVASSGLNLSRGSFNVGSGIAHSSTLNSSSDGYLSTNEATLGRKVI
HEKFGTGTIVSIQDSGNDKKLTIAFDKQGVKILLLSFAKLKMV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaatcattacttaataaagaacaatatgaaggagcaactacagttgatggt
caagtattaattttagcgggagcgggatctggtaaaactagagtcttaactcatagaatg
gcgtacatgattgaagacttaggtattgcaccatacaaaatattagctataacttttacc
aataaagcagccaaggaaatgaaagacagagttaaggcgcttatcggtgaaaaagctgaa
aatatgtggatttctactttccattcaacttgtgtaagaattttaagaagagaaatagac
aaaataggatataaaagcaattttacaatatatgatacatcggatcaaaaaactttagtg
aaggaatgcatgaaatctattagcattaatgaaaaagatataacagagcaagaaataatg
ggtaaaataagtaaagctaaagatagaatgcaaactgctagaagttttaagctagaaaat
gagagtaattttagagaaaataaaatcgcagatgtatatgaaatgtatcaaaaaaggctt
aaagaaaacaatgccttagattttgatgatttgatatttaaaacagttgaactctttaaa
agtaatccagaagttttagaattttatcaaaacaaatttcaatatattatggttgatgag
tatcaagatacaaatgctgttcaatatgaattagttagattacttgcagatagatataag
aatatttgtgttgtaggagatgatgatcaatgtatctatcaatggagaggtgcggatatt
caaaatattcttgattttgaaaaagactatccaggtgctaaggtaataaaacttgaacag
aattatagatctaaagcaaatatattaaatgcagctaatgttgtaattgttaataatgca
aatagaaagagcaaagtattaagaacggaacaagaagaaggaagtaaaattaagatatat
agagcgtattcggatggtgatgaaggagattttgttggaaagcaaattgtcgatataaaa
aaagagcaagaaaagcattatagtgattttgctgtattatatagaacaaatgctcaatca
agaatctttgaagagagttttagaagaaagggtattccatataaaattgtagggggtaca
agattctatgatagaaaagaaataaaagatatattagcatacttaaaagtcattgttaat
ctacaagatgatgttagtatcagaagaattataaacgttcctaagagaagcattggtgat
gcaactgttaacaaaattcaagaattcgctacagattttgagctgaatatgtgggatgct
ttatcagaggttagatctatttctacattaacacctagaaatgtttctagtattgagcct
tttgttcaattgatggataattttatggtacttagtgaaacagtacccgtatcagtttta
attgaaactattttagaagatactggttatatggaagtgttaaaaaagtccaatgaaatc
gaagataagagcagaattgaaaatttaaaagaattagtatcagatgctgttgattttgaa
aagagtagcgaagataaatctttagctgcatatttagaaaaagtatctttagttcaggat
actgataagattgaagaagaggatgatatggtagttctaatgactgttcacagtgcaaaa
gggttagaatttccagtagtattcatggttggtatggaaaatggaattttcccaggaact
gcatcatttgaaaaagaatctgaaatggaagaatcaagaagactatgctacgttggtata
acaagagcaaaagaaacactatttatgacatcagctgaagttagaagggtttttggtaaa
acagttgcatatccacaatcggattttattaatgaaataaaaccatcattaaaggaatat
gttgctaatgataaggcaaatattaagagtagagaaggctttgctcaaaaaagttcgtat
aataatccgcatagtctaagaaataatcttaggggaaatgctacagttgcaagtagtgga
ttaaatttaagcagaggaagttttaatgtaggaagtggtatagcgcattcgtctacatta
aattctagcagtgacggatatctaagtactaatgaagcaactttgggacgaaaagttata
catgaaaagtttggaacaggaactatcgtgtcaatacaagattctggtaatgataaaaaa
cttactattgcttttgataagcaaggtgtaaaaatattgctattatcatttgctaaactt
aagatggtataa
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