Clostridium saccharobutylicum: CLSA_c06050
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Entry
CLSA_c06050 CDS
T02876
Symbol
ispH1
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH
KO
K02945
small subunit ribosomal protein S1
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CLSA_c06050 (ispH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
csb03011
]
CLSA_c06050 (ispH1)
Ribosome [BR:
csb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CLSA_c06050 (ispH1)
Bacteria
CLSA_c06050 (ispH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AGX41618
UniProt:
U5MM65
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All DBs
Position
628664..629818
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AA seq
384 aa
AA seq
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MFNEETENSMSQLLNEYDVKKLTRGEILKGTVLDVSDKEASVNINYAFDGLISKEELSAD
GKDPRDVVSIGDEIDVYVISPNDGEGYVELSLIRALEIKEKEDIKDAFNNQNNIIVKIKE
EIKGGLIAYYGNVRVFIPGSLASRQRIELSTLLGKDLEIRITELDLRNNKVVGSRRAIEE
EEYNKNKKAIWANLKEGEKTKGVVKKLVKFGAFVDIGGVEGLIHISDLSWERVNKPEDVV
KEGDMVEVFIGSVDRDKERLSLILKDVAKEPWTVHSSDLKEGDIVEGKVVRLTSFGAFVE
LFEGIEGLVHLSEITDDNIVKSSDVLELNQKVKVKVLSINKEDKKIALSIKDATESSKEY
LNYIDNDEEDGTSLGDLLKGFKFE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagaaacagaaaatagcatgagtcaacttttaaatgaatacgatgtaaaa
aaattaactagaggtgaaattctaaaaggaacagtattagatgtaagtgataaagaagct
tcagtaaatataaattatgcttttgatggtttaatatcgaaagaagagttatctgctgat
ggaaaagatccaagagatgttgttagcattggtgatgaaatcgatgtatatgttatatct
ccaaatgatggtgaaggttacgttgaactttcactaataagagctttagaaataaaggaa
aaagaagatataaaagatgcttttaataatcaaaataatataatagttaaaataaaagag
gaaattaaaggaggattaattgcttactatggaaatgtaagagtatttattccaggatct
cttgcaagtagacaaagaattgaacttagcactttattaggaaaagatttagagattaga
attacagaattagatttaagaaataataaagttgttggttctagaagagcaattgaagaa
gaggaatataacaaaaataagaaagcaatatgggctaacttaaaagaaggagaaaaaaca
aaaggtgttgtaaaaaagctagttaagtttggagcatttgtagatattggcggagttgaa
ggtttaattcacatttcagatttatcatgggaaagagtaaataaaccagaagatgtagta
aaagaaggagatatggttgaagtattcataggaagtgtagatagggacaaggaaagatta
tctttaattttaaaggatgtagctaaggaaccttggacagtacatagctcagatttaaaa
gaaggagatatagtagaaggaaaagttgtacgtctaacttcatttggagcatttgttgaa
ttatttgaaggaatagaaggattagttcatttatcagaaattactgatgataatattgta
aaatcttcagatgtattagaactaaaccaaaaagtaaaagtaaaggtattaagtataaat
aaagaggataaaaagatagctttaagtattaaagatgctacagaaagtagtaaagaatat
cttaactatattgataatgatgaagaagatggaacatctttaggcgatttacttaaggga
tttaaatttgaatag
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