Clostridium saccharobutylicum: CLSA_c06730
Help
Entry
CLSA_c06730 CDS
T02876
Symbol
xynD1
Name
(GenBank) arabinoxylan arabinofuranohydrolase XynD
KO
K15921
arabinoxylan arabinofuranohydrolase [EC:
3.2.1.55
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00520
Amino sugar and nucleotide sugar metabolism
csb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CLSA_c06730 (xynD1)
Enzymes [BR:
csb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
CLSA_c06730 (xynD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
RicinB_lectin_2
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
AGX41686
UniProt:
U5MPR6
LinkDB
All DBs
Position
complement(706851..708863)
Genome browser
AA seq
670 aa
AA seq
DB search
MVYKKMLIPLLSLSICLTGVSFECKDANAAVVTSNSSYESQFNSIALAKGYKDLTQGNPC
MTQKFAADPGVMEYNGRVYVYSTNDHYMYDSKGAVIANSFDNVQTINCMSSDDMANWTDH
GTINVAGSNGAAKWATHSWAPAAAHKTINGKERFFLYFADRGGGIGVLTSDSPTGPWKDP
LGHALVNKATPNCSNITWLFDPAVFIDDDGSAYLSFGGGVPNGQAAHPKTSRVVKLGADM
ISLAGTPTTIDAPYILEDSGLNKDGNTYYYTYCTNWESRSNSSDPGVAEIAYMTSNSPTG
PFTYKGTILKNPGKYFGCYGNNHHSIVKFKNKWYIFYHSQWLENKMGTNKGYRSAQVDEI
NISNGKISPATGTLTGVAQTKDLNPYTLNQMSTMAWQGGIKVQGLGNTDVQMSAGNWVGV
SNVGFGTGPASITMKVSSQKGSVIKVCTDNPSNKALGYVVVPPTGNAFTNVSANVSNITG
TKKLFFVSSNDCVVDNWQFSKNPASGTGSSTTKDSTNTSGTTQTLSDGWYYIKNVNAQKY
LQVANNVGKAAQNVELGTGSGAAGQKWYLKNVGNGYVTLKSALGNYMLDVYNGENKDGSN
IRIFNAYSNNAQKFALKSSSTNGAYGITTMSSNQTKALDDYNFQTFDGANVCQWTYGGTN
NQLWIFEAAK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggtttacaaaaagatgcttataccattgttatcacttagcatttgtttaacaggtgtt
tcttttgaatgtaaagatgcgaatgcagctgtggtaacatcaaattcatcttatgagtca
caatttaattctattgcactagcaaaaggatataaagatttgactcaaggaaatccgtgc
atgactcaaaagtttgctgctgatccaggggtgatggagtataacgggagagtgtatgta
tattcaacaaatgatcattacatgtatgacagtaaaggggctgtaattgctaactcattc
gataacgttcaaacaattaactgtatgtcttctgatgatatggcgaattggactgatcac
ggtacaattaacgttgctggaagcaatggtgctgctaaatgggcaacacattcatgggct
ccagcagcagcacataaaactataaatggaaaggaaagattctttctttatttcgcagat
agaggaggcggaattggagtattaacaagtgattcaccaacaggaccatggaaagatcca
ctaggacatgccctagttaataaagctactccaaattgctctaatattacttggcttttt
gatccagcagtttttattgatgatgatggaagtgcatatttatcttttggcggcggtgtt
ccaaatggacaggcagcacaccctaaaacatctagagttgttaaacttggggctgatatg
attagtcttgctggaactcctactacaatagatgcaccatatatacttgaggactcagga
ctcaacaaagatggaaatacttattactatacttattgtacaaattgggaatctagatct
aatagcagtgatccaggtgttgcagagattgcatacatgacaagtaatagtccaacaggg
ccatttacctataagggtactattttaaagaatcctggaaaatattttggatgctacgga
aataatcaccattcaattgtaaaatttaaaaacaaatggtatatcttctatcattctcag
tggcttgaaaataagatgggcactaataagggatacagaagcgcacaagttgatgagata
aacataagtaatggaaaaatatctccagcgactggaacacttactggtgtagcacaaaca
aaagatttgaatccttatacgttaaatcaaatgtcaactatggcttggcaaggaggcata
aaggtacaaggtttaggaaatacagatgttcaaatgagcgctggtaattgggttggagtt
tctaatgtaggatttggaacaggtccagcatctattactatgaaggtatcatcgcaaaaa
ggatcagtaattaaagtatgtactgataatccatccaataaagctttaggatatgttgtt
gtaccaccaacaggaaatgcatttacaaatgtatcagcaaatgtttctaatattacagga
acaaagaaattgttctttgtatcatctaatgattgtgtagtagataattggcaattttct
aagaatcctgcttcaggaacaggtagtagcactacaaaagatagtactaatacaagtgga
actactcaaacattaagtgatggatggtattacatcaaaaatgttaatgcacaaaaatat
cttcaagttgcaaataatgtaggaaaagctgctcaaaatgttgaacttggtacaggttca
ggagctgctggtcaaaaatggtacttaaaaaatgtaggaaatggctatgttacattaaag
agtgctttaggtaactatatgcttgatgtatacaatggtgagaataaagatggctcaaat
attcgtatttttaatgcatattcaaacaatgcacaaaagtttgctcttaaatcttcttca
acaaacggagcatatggaattacaactatgagtagtaaccaaactaaagcattagatgat
tataacttccaaacttttgatggtgccaatgtatgtcaatggacttatggtggaactaat
aatcagctatggatatttgaagcagccaaatag
DBGET
integrated database retrieval system
