Clostridium saccharobutylicum: CLSA_c06900
Help
Entry
CLSA_c06900 CDS
T02876
Symbol
xynD2
Name
(GenBank) arabinoxylan arabinofuranohydrolase XynD
KO
K15921
arabinoxylan arabinofuranohydrolase [EC:
3.2.1.55
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00520
Amino sugar and nucleotide sugar metabolism
csb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CLSA_c06900 (xynD2)
Enzymes [BR:
csb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
CLSA_c06900 (xynD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_6
Glyco_hydro_43
CBM_35_2
Motif
Other DBs
NCBI-ProteinID:
AGX41703
UniProt:
U5MME9
LinkDB
All DBs
Position
729827..731407
Genome browser
AA seq
526 aa
AA seq
DB search
MIRRSATFLLTFALLFGPGLNTYTASASTGRENATLGSTNKSTSAASTSALAKMPGDSNP
LMTQKFGADPYAMVYNGRVYIYMSSDSFEYDSTGNIIDNDYKNIKSITCISSDDMVNWTD
HGEIPVAGSNGPAKWASNSWAPAVTHKVINGKEKFFMYFANNGGAIGVLTADTPIGPWKD
PLGKPMITTNTPGANGVEWLFDPAVLIDDDGTGYLYFGGGIPGGKNPTQSQIANPKTGRV
IKLDSDMIHTTGSASTIDAPFMFEDSGIHKYNGKYYYSYCSNFSGTHPTGTPPQGEIAYM
VSDNPMGPFTYKGTFLKNPQTYFGVGGNNHHAVFQFNNQWYVTYHAQTLGKAMGIKKGYR
SPHINKVEYDGSGLIKNVQEDMQGVGQVANLNPYKRTEAETIGWNGGISTERCQAPGSMV
NSINLDVTSINNGDWLAVSKADFGTGAKSFKANIASTVGGTIEIHLDSLDGQLIGTLNVN
ATGGEQKWKEMQCNVKSVSGVHNIFFKFNGANNKNLFNMDYWQFNS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgattagaagatcagcaacatttttattgacttttgcattattatttgggcctgggttg
aatacgtatacggcgagtgcaagtacaggtagagaaaacgctacattaggaagtacaaat
aagtctacatcagctgcaagtacaagtgcacttgccaaaatgccaggggattctaatcct
cttatgacacaaaagtttggagcagatccatatgcgatggtttacaatggaagagtatac
atttatatgagtagtgacagttttgagtatgacagtactggaaatataattgataatgat
tataagaatatcaaatcaataacttgtatttcatctgatgatatggtcaattggacagat
catggtgaaattccagttgcaggatcaaatggtccagcaaaatgggcaagtaattcttgg
gctccagctgttacacataaagttattaatggaaaagagaagttttttatgtattttgca
aataatggaggggcgattggagttcttacagcagatacaccgattggaccatggaaagat
cctcttggaaaacctatgattactaccaatactcctggagctaatggtgttgaatggctt
tttgatccagcagtattgattgatgatgatggaacaggttatttgtattttggtggagga
ataccaggaggaaagaatcctactcaaagtcaaattgcaaatcctaaaacaggcagagtc
ataaaattagatagtgacatgattcataccactggaagtgcatcaacaatcgatgctcct
tttatgtttgaggattctggtattcacaaatataatggcaaatactattattcatattgt
tctaatttttctggtacacatccaactggaactccgcctcaaggggaaattgcatatatg
gtaagtgataatcctatggggccatttacgtataaagggactttccttaaaaatccccaa
acttattttggagtaggtggaaataatcatcatgcagtttttcaatttaataatcaatgg
tatgtaacatatcatgctcaaactcttggaaaagccatgggaattaaaaaaggatatcgt
tctcctcatattaacaaggttgaatatgatggaagcggacttattaaaaatgtacaagaa
gacatgcaaggtgtaggtcaagttgcgaatcttaatccatataaaaggactgaagcagaa
actattggatggaatggaggtatttcaaccgaaagatgccaggcaccaggaagtatggta
aatagtattaatcttgatgttacgagcataaataatggagattggcttgctgtatcaaaa
gctgattttggaactggagctaagtcattcaaagcaaatattgcatcaactgtaggtgga
acaatagaaatacatcttgatagtttagatggtcaacttattggtactcttaatgtaaat
gctacaggtggagagcagaaatggaaagaaatgcaatgtaatgtaaagagcgtcagtggt
gtccataatattttctttaagtttaatggagctaataataaaaacttatttaatatggat
tattggcaatttaactcttaa
DBGET
integrated database retrieval system
