Clostridium saccharobutylicum: CLSA_c11010
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Entry
CLSA_c11010 CDS
T02876
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLSA_c11010 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c11010 (recO)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLSA_c11010 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLSA_c11010 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
KCTD11_21_C
Motif
Other DBs
NCBI-ProteinID:
AGX42108
UniProt:
U5MNL5
LinkDB
All DBs
Position
1223628..1224377
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AA seq
249 aa
AA seq
DB search
MIDLSVFETKAVIIKTQDFKENDKLVWFYTEKLGKITAVVRGAKRSKSKFLALTLPLCYG
EYMVYKGKNLYTLQEGKILNSFQGLLDNLNKLTYSSYLCELIDIACTENEISNELFRNLV
TTLYLLSTDALDYELLIRSFELKLLRSTGYNLTLDNCSICRKKISAANYISLSYYGGVCD
ECPKEHGLYISKGAYNALRFLMNISVDKLYRLNLSTEVKAEIEKVTTFLISNNYAKKPKS
LEMLKFIKE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctgtcagtttttgaaactaaagctgtaattataaaaacgcaggattttaaa
gaaaatgataaactggtttggttctatactgaaaaattaggaaaaatcactgcagtagtt
agaggtgctaaaagaagtaaaagtaaatttttggctcttacattgccactatgttatgga
gaatatatggtatataaaggcaagaatttgtatacacttcaagaaggaaaaattttaaat
tcatttcaagggcttttagataatttgaataaacttacatattcatcatatttgtgtgag
ttaatagatatagcttgtactgaaaatgaaattagtaatgaactttttagaaatttggtt
acaacactatatctattaagtacagatgcattagattatgaattgttaataaggtcgttt
gaattaaaattgttgagaagtacaggttataatttaacattagataattgtagtatttgc
agaaaaaagatatcagctgcaaattatataagtttatcttactatggtggggtgtgtgat
gaatgtcctaaggagcatgggctatacatatctaaaggcgcatataatgctttgagattt
ttaatgaatattagtgtagataaattatatagattaaatttaagtactgaggtaaaagct
gaaatagagaaagttacaacttttctaatatcaaataattatgctaaaaaaccaaagagt
ttagaaatgttaaaattcattaaggagtga
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