Clostridium saccharobutylicum: CLSA_c11750
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Entry
CLSA_c11750 CDS
T02876
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03030
DNA replication
csb03410
Base excision repair
csb03420
Nucleotide excision repair
csb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSA_c11750 (polA)
03410 Base excision repair
CLSA_c11750 (polA)
03420 Nucleotide excision repair
CLSA_c11750 (polA)
03440 Homologous recombination
CLSA_c11750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csb03032
]
CLSA_c11750 (polA)
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c11750 (polA)
Enzymes [BR:
csb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSA_c11750 (polA)
DNA replication proteins [BR:
csb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLSA_c11750 (polA)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLSA_c11750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSA_c11750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGX42180
UniProt:
U5MNK8
LinkDB
All DBs
Position
1316586..1319189
Genome browser
AA seq
867 aa
AA seq
DB search
MKRLLILDSNSLMNRAFYALPPLTNSDGINTNAIYGFMNMLFKMKDEINPDSIIATFDLK
APTFRHKEYAEYKAGRKMMPPELAEQFPIIKDLFKLMGIKIFELAGFEADDLIGTVSKFA
ENNDTEVFVVTGDKDALQLASENTKVIITKKGVTETASYDIKSFMDEFEITPTQFIDVKG
LMGDKSDNIPGVPGVGEKTAFKLIKEYGSIEEVLNNIDNIPGKKLKENLQNNMEQAVFSK
KLATIMREVPIELTVEDIHNSEKENIEEIKKMLVKLEMKSILSKFKNDEPEEACNIEIKN
IDTIEEMKELLLNKSERIYIDYTLENASKYSTLELEYLILGEESHGNIINFKHINAENKH
ESLEILKKCMEDENVKKVIHDGKNFITFLNKNNIEIKGFDFDTAIASYLIDSSKSQYEIL
ELVNHYIGDNPSGDGISFKGMLSTYLPILYKELKERLHKEDMDKLYYEVEHPLIYVLSSM
ESIGFNINEGMLDELKVKFKKEIEETQAEIYKLSEEEFNISSPKQLGKILFEKLDLPVIK
KTKTGYSTNQEVLEKLMDKHEIIPKIMYYRQITKINSTYVEGLKNVIDEDGRIHSNFNQT
VTTTGRLSSTEPNLQNIPVRHEMGKEIRKVFIPMEDGDILVSCDYSQIELRVLAHIADDA
NMIDAFKHHSDIHTKTASEVFKVPVEEVTSLMRSRAKAVNFGIVYGISAFSLAQDLKISK
KEAEEYMSIYFDRYPKIKGYLENVVEEAKDKGYVLTILNRRRFIPEIKSSNKIVKALGDR
LAMNAPIQGSAADIIKLAMVNVYKKLNEKKLKSELILQVHDELILNAKKDEFEEVKKLVV
EEMEKAIKLKVDLDVDVNSGSTWYEAK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggttgttaattttagattcgaactcacttatgaatagggctttttatgcattg
cctcctcttacaaatagcgatggaataaatactaatgcaatttatggttttatgaatatg
ttatttaagatgaaggatgagattaatcctgatagtataattgctacttttgatttaaag
gcaccaacttttagacataaggaatatgcagaatataaagcaggaagaaaaatgatgccg
ccagagcttgcagaacagtttcctataataaaagatttatttaaacttatgggaattaag
atttttgagctagcaggatttgaagcagatgacttaattgggacagtatctaaatttgct
gaaaataatgatactgaagtttttgttgttacaggagataaggatgctcttcagttagct
tctgaaaatactaaagttataataactaaaaaaggagttactgaaactgcatcatatgat
ataaaatcatttatggatgaattcgaaataacgccaactcaatttattgatgttaaaggt
cttatgggagataagtctgataatattccaggtgtaccaggagttggtgaaaagacagcg
tttaaacttattaaggaatatggatctatagaagaagtacttaataatattgataatatt
ccaggaaagaagcttaaagaaaatttacagaataatatggaacaggcagtattttcaaag
aaacttgcaactataatgagagaggttcctatagaattaaccgttgaagatattcataat
agtgaaaaagaaaatattgaagaaattaaaaaaatgcttgttaaacttgaaatgaaatca
atactatctaaatttaaaaatgatgagcctgaagaggcatgtaatatagaaattaagaat
atagatactattgaagaaatgaaggaattacttctaaataaaagtgaaagaatttatata
gattatacattagaaaatgcatctaaatattctacattggaacttgaatatttaattctt
ggtgaggaaagccatggaaatataataaattttaaacatataaatgctgaaaacaagcat
gaatctttagaaattttgaagaaatgtatggaagatgaaaatgttaaaaaggtaatccat
gatggaaaaaattttattacatttttaaacaagaataatattgaaattaaaggatttgat
ttcgatactgcaattgcatcttatttaattgattcttcaaaaagccaatatgaaatatta
gaattagtaaatcattatataggtgataatccaagtggagatgggattagctttaaggga
atgctttcaacgtatttgccaattctttataaggaattaaaagaaagacttcacaaagaa
gatatggataaactttattatgaagttgagcacccattaatatatgtactttcatcgatg
gaaagtataggatttaacataaatgaaggtatgttagatgaattaaaagtgaaatttaaa
aaggagatagaggaaactcaagctgaaatatataaattatctgaagaagagtttaatata
agttctcctaaacaattaggtaaaatattgtttgaaaaattagatttaccagtaattaag
aaaactaaaacaggatattcaaccaatcaagaagttttagaaaaattaatggataaacat
gaaataattccaaagataatgtattatagacagattacaaagattaattctacatatgtt
gaagggttaaaaaatgttatagacgaagatggacgcattcattctaattttaatcaaact
gttactacaacaggaagattatcaagtactgaaccaaatcttcaaaacattccagtaaga
catgaaatgggtaaagaaataagaaaggtatttataccaatggaagatggggatatacta
gtttcttgtgattactcacaaatagaattaagagtgcttgcacatatcgctgatgatgcc
aatatgatagatgcatttaaacatcatagtgatatacatacaaagacagcttctgaagta
tttaaggttccagttgaggaagttacttcacttatgagaagtagagctaaggctgtaaac
tttggaattgtatatggaataagtgcgtttagtttagctcaagatttgaaaatttctaaa
aaagaagcagaagaatatatgtcaatatactttgatagatatcctaaaataaagggatat
ttagaaaatgtagtagaggaagctaaggataagggatatgttcttactatattaaataga
agaagatttataccagagataaaatcttcaaataaaatagtaaaagctttaggtgataga
ttagctatgaatgctccaattcagggaagtgcagcagatataataaagcttgctatggtt
aatgtatataagaaattgaacgaaaagaaattaaaaagtgaattaatacttcaagttcat
gatgaacttattttgaatgcaaagaaagatgagtttgaagaagttaagaaactagtggta
gaagaaatggagaaggcaatcaaactaaaagttgaccttgatgttgatgttaactcagga
agcacttggtatgaagcaaaataa
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