Clostridium saccharobutylicum: CLSA_c12250
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Entry
CLSA_c12250 CDS
T02876
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c12250 (sbcD)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLSA_c12250 (sbcD)
Archaeal homologous recombinant proteins
CLSA_c12250 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGX42228
UniProt:
U5MNX7
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All DBs
Position
1383047..1384270
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AA seq
407 aa
AA seq
DB search
MRILHTADWHLGKNLEGQSRMDEQEQFLNDFVDIVQENNIDLIMIAGDIYDNPNPPARAE
KMFYDTLKRISKNGERLTLVISGNHDNPDRLVAAGPLARDHGIIMVGTPKTVVPCGQYGK
HKVLDSGEGFIEIEVNGERSVILTVPYPSEKRLNEVLYDGMDEEEEKVKSYSDRIFLLFN
SLKQHYREDTINLAIAHLFTMGSEEGGSERSIQLGGSYIVDGECFPKESQYVALGHVHKP
QVVPGTQKRIRYCGSPIHYNKKEISFEKKCFIVDAKVNEECEIREISLKVYKPIEVWKCN
SIEEAILMCEENKDKECWVYLEVKTDRYIREDEIKQMKEFKKDILEIMPKVKGLSMDDSE
GLNLSEKSFEDIFKEFYEKERKVEPDEEVVDLLLSIVSEESALDETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgagaatattacatacagcagattggcatttaggaaaaaatttagaaggacaaagcaga
atggatgaacaggaacaattcttgaatgactttgtagatattgttcaagaaaacaatata
gatttaataatgattgcaggagatatttatgataatcccaatcctccagcgagagctgaa
aagatgttttatgatactttaaagagaatatctaaaaatggagagagacttactttagtt
atatccggaaatcatgataatccagatagattagttgcagcaggaccacttgctcgtgac
catggaattattatggttggaactcctaaaactgtagttccttgtggacaatatggtaaa
cataaagttttagattctggagagggatttattgagattgaagtaaatggtgaaagatct
gttatattaacggtaccttatccaagtgaaaagagacttaatgaagttctgtatgatggt
atggatgaggaagaagaaaaagtgaaatcttatagtgatagaatttttttgttatttaat
tcattgaaacagcattacagagaagatactataaatctagcaatagcacatttatttact
atggggagcgaagaaggtggttctgaaagaagcattcaactagggggaagttatattgtt
gatggagaatgttttcctaaagaatctcaatatgtagctttaggtcatgttcataagccg
caggtagttcctggtacacaaaaaagaataagatactgtggttcaccaattcattacaat
aagaaagaaatttcctttgaaaagaaatgttttattgttgatgcaaaggtaaatgaagaa
tgtgaaataagagaaatttcattaaaagtatataaaccaattgaagtatggaaatgtaat
agcattgaagaagcaattttaatgtgtgaagaaaataaagataaagaatgttgggtttat
ttagaagttaaaacagataggtatataagagaagacgaaattaagcaaatgaaggaattt
aagaaagatatccttgaaataatgcctaaagtaaaaggattgagcatggatgatagtgaa
ggtttgaatctatcagaaaagtcatttgaagatatatttaaagaattttatgaaaaggaa
cgaaaagtggaacctgatgaagaggttgtagatttacttttatcaattgtaagcgaggag
agtgctttagatgaaaccaattaa
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