Clostridium saccharobutylicum: CLSA_c12480
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Entry
CLSA_c12480 CDS
T02876
Symbol
pyrF
Name
(GenBank) orotidine 5'-phosphate decarboxylase PyrF
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00240
Pyrimidine metabolism
csb01100
Metabolic pathways
csb01240
Biosynthesis of cofactors
Module
csb_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CLSA_c12480 (pyrF)
Enzymes [BR:
csb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
CLSA_c12480 (pyrF)
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Gene cluster
GFIT
Motif
Pfam:
OMPdecase
HTH_Tnp_IS1
Motif
Other DBs
NCBI-ProteinID:
AGX42251
UniProt:
U5MRF1
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Position
1413001..1413873
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AA seq
290 aa
AA seq
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MTSYIIDKLYDRVEKRGVVCVGLDTALDYVPEHIKNGRTPGEAIFEFNKQIIDSTYDVAA
CFKVQIAYYEALGIEGLVAYKNTLDYLREKDEIIIADIKRGDIAATAKMYAKAHFEGDFE
ADFITLSPYMGMDSIEPYLPYLEKGNKGVFSLVRTSNPGAEDIEYLDTTENKKVFEIVAD
KITEMAKNCVGECGYTAIGGVIGCTHVEEGKKIRANYNNMFFLIPGYGAQGGTAEDVALY
LNNGNGGVVNSSRGILLAYKKANKPEEFALCAREEAIKMRDAIRKAVKEA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacataattgataaattatatgatagagttgaaaaaagaggtgttgtttgt
gtaggactagataccgccttagattatgtgccagagcacattaaaaacggcagaacacca
ggtgaagcgatatttgaatttaacaaacaaattatagattcaacttatgatgtagcagca
tgttttaaagttcaaattgcatattatgaagcgttaggaattgaagggttagttgcatat
aaaaatacactagactacttaagagaaaaggatgaaataataatagcagatatcaaaaga
ggagatatagcggctactgcaaagatgtatgcaaaagctcattttgagggagattttgaa
gcggattttataacattaagcccatacatgggaatggatagtatagagccttacttacct
tatttggaaaaaggaaataaaggtgttttcagcttagtaagaacatctaatcctggagca
gaggatattgaatatttagatacaactgaaaataaaaaagtttttgaaatagtagcagat
aaaataacagaaatggctaaaaattgcgtaggagaatgtgggtatactgcaataggtgga
gttattggatgtactcatgttgaagaaggtaaaaaaataagagcaaactacaataatatg
ttctttctaattccaggctatggtgcacagggtggaactgcagaggatgtagcattgtat
ttaaataatggaaatggtggagttgttaattcttcaagagggatattacttgcatataaa
aaagctaataagcctgaagaatttgcattatgtgctagagaagaagctataaagatgaga
gatgctataagaaaagccgtaaaggaagcataa
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