Clostridium saccharobutylicum: CLSA_c12570
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Entry
CLSA_c12570 CDS
T02876
Symbol
iII1
Name
(GenBank) exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03030
DNA replication
csb03430
Mismatch repair
csb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSA_c12570 (iII1)
03430 Mismatch repair
CLSA_c12570 (iII1)
03440 Homologous recombination
CLSA_c12570 (iII1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csb03032
]
CLSA_c12570 (iII1)
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c12570 (iII1)
Enzymes [BR:
csb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSA_c12570 (iII1)
DNA replication proteins [BR:
csb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLSA_c12570 (iII1)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLSA_c12570 (iII1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGX42260
UniProt:
U5MNT9
LinkDB
All DBs
Position
complement(1425681..1426301)
Genome browser
AA seq
206 aa
AA seq
DB search
MKLLFFDTETTSVKPGSICQLSYITVDASVKPQITTGKNFFFTVDEMDPSAQEIHGFSLE
KLYELSNGQYFEDLVPEFIQDFEEADFLIGHNVNFDVRFLKHELSILGENFIPKNTFCTM
AYYRDICKIPKANGEIKNPKLSEVIDWLNISSTQIAETSEKLFEGSGNYHDARFDTAAAY
LTVIDGLKKGYFPKGYFTNLLQSKNK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattgttttttgatacagaaacaacaagtgtaaagccaggcagcatatgccaa
ttaagttatataactgttgacgctagtgtaaagccacaaattactacaggcaaaaacttt
ttctttacagttgatgaaatggatccttctgcacaagaaattcatggattttcattagaa
aaactttatgaattatctaatggacaatactttgaagatttagttccagaatttattcaa
gattttgaagaagcagattttttaataggacataatgttaattttgatgttaggttttta
aaacatgaactttcaatactaggcgaaaatttcattcctaaaaatacattctgcactatg
gcttattatagagatatttgtaaaattccaaaggcaaatggagaaattaaaaatcctaaa
ttatctgaagtaattgactggcttaatatatcaagcacacaaattgctgaaacatctgaa
aaattattcgaaggcagcggtaattatcacgatgcaagatttgatacagccgcagcatat
ttaactgtgatagatggtttgaaaaaaggatactttcctaaaggatattttactaatctt
ctacaatctaaaaataaataa
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