Clostridium saccharobutylicum: CLSA_c13960
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Entry
CLSA_c13960 CDS
T02876
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb02024
Quorum sensing
csb03060
Protein export
csb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CLSA_c13960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CLSA_c13960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLSA_c13960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csb02044
]
CLSA_c13960 (ffh)
Enzymes [BR:
csb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CLSA_c13960 (ffh)
Secretion system [BR:
csb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CLSA_c13960 (ffh)
Eukaryotic Sec-SRP protein
CLSA_c13960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
AAA_17
CbiA
Zeta_toxin
nSTAND3
AAA_31
AAA_16
SRPRB
MMR_HSR1
AAA_30
APS_kinase
AAA_25
AAA_14
ParA
ResIII
AAA_18
ATPase
KAP_NTPase
ATP_bind_1
NPHP3_N
AAA_33
PduV-EutP
Arf
ArsA_ATPase
TsaE
cobW
Motif
Other DBs
NCBI-ProteinID:
AGX42399
UniProt:
U5MNR1
LinkDB
All DBs
Position
1572447..1573799
Genome browser
AA seq
450 aa
AA seq
DB search
MAFEGLGEKLQETFRKLKGKGKLTEKDIKEAMREVKLALLEADVNYKVVKQFISSVSSKC
VGNEVLESLTPGQQVIKIVNEELTNLMGGSESKLNYNSSGPTVIMLVGLQGAGKTTMCGK
LALSLRKDNKKPLLVACDIYRPAAIKQLEVVGKQIEIPVFSMGDKVNPVDIAKAGIAHAK
DNGNNIVIIDTAGRLHIDEDLMQELKNIKENVKPSEILLVVDSMTGQDAVNVAQNFNEDL
DLSGVILTKLDGDTRGGAALSIKSIIDKPIKYVGLGEKMNDFEVFHPDRMASRILGMGDV
LSLIEKAQEAIDEKEAADLGKRMLNQEFNFDDYLTAMEQMKKLGPLNKLLEMLPGVNTKE
LQGIDLEKSGEALDRTKAIIQSMTAKERKNPSIVAKSASRKNRIVKGSGTTLQELNKLMK
GYEMMKKQMKHMKSFQKQAKKGGLFGKLPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgaaggtttaggagaaaaacttcaggagacttttagaaaattaaaaggtaaa
ggaaagttgactgaaaaagatataaaagaggccatgagagaagtaaagcttgccttatta
gaagcagatgttaactataaagttgttaagcaatttatttcttctgttagttctaaatgt
gttggaaatgaagttcttgaaagtttaacaccaggacaacaagtaataaaaatagttaac
gaagaacttactaatcttatgggtggaagtgaaagtaaacttaactacaatagtagtgga
cctacagttataatgttagttggtcttcaaggagcaggtaaaactacaatgtgtggtaaa
cttgcactaagtcttagaaaagataataagaagccactattagttgcttgtgatatttat
agaccagcagcgataaaacaattagaagttgtaggaaaacaaattgaaattccagtattt
tcgatgggagacaaagtaaatcctgttgatatagcaaaagctggtattgctcacgctaaa
gataatggtaataacatagttattatagatactgcaggtagacttcatattgatgaggat
ttaatgcaggaattgaaaaacattaaagaaaatgttaaaccatcagaaatacttttagtt
gttgattcaatgacaggtcaagatgctgttaatgtagcacaaaattttaatgaagattta
gatttaagtggagttatattaacaaagttagatggagataccagaggtggagctgcttta
tcaataaagagcataatcgacaagccaataaaatatgttggtcttggtgaaaagatgaat
gactttgaagttttccatccggacagaatggcatctaggatactgggaatgggtgatgta
ttatcacttattgaaaaggcacaagaagctattgatgaaaaagaagctgctgatttagga
aaaagaatgttaaatcaagaatttaactttgatgactatttaacagcaatggaacaaatg
aaaaaacttggaccactaaataagcttttggaaatgttacctggagtaaatacaaaggaa
ttacaaggtattgatttagaaaagagtggagaagcattagatagaactaaggctattatt
cagtctatgacagctaaggaaagaaaaaatcctagcatagtagctaaatcagcttcaaga
aaaaatagaatcgttaagggttctggtacaacacttcaagaacttaataaactcatgaag
ggttatgaaatgatgaaaaaacaaatgaagcatatgaaatcattccaaaaacaagcgaaa
aaaggtggattatttggtaagttacctttttaa
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