Clostridium saccharobutylicum: CLSA_c14440
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Entry
CLSA_c14440 CDS
T02876
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csb03016
]
CLSA_c14440 (truB)
Enzymes [BR:
csb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLSA_c14440 (truB)
Transfer RNA biogenesis [BR:
csb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLSA_c14440 (truB)
Prokaryotic type
CLSA_c14440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Dit_N
Motif
Other DBs
NCBI-ProteinID:
AGX42444
UniProt:
U5MNV0
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All DBs
Position
1616063..1616992
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AA seq
309 aa
AA seq
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MKKGIEISLMKKEIKTSNINGILNVFKNKGMSSFDVVRKIKFLANEKKVGHTGTLDPEAT
GVLLVCIGKATKIIDYIMNSRKVYEVKFLLGTKTTTYDLEGEIIEQKETSHLRDEEVFNV
TLSFVGEYDQVPPMYSALKKNGVRLYDLARQGIEVEREARRINIFDISNLEINLPYVSMK
VVCSKGTYIRSLCYDIGEKLNVGATMVDLNRCETSIFKQEESVNIEELTKENIKDYIITI
EEALAFYPKLTVKSSFTKLLVNGVKVFDKRLSSEKREKNVLYRVYDTEETFIGLGKQDDE
GFKIEKLLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggaatagagatttcacttatgaaaaaagaaataaaaacttcgaatataaat
ggaatattaaatgtattcaaaaataagggaatgtcttcttttgatgtagttagaaaaata
aaatttttagctaatgaaaaaaaggtgggtcatactggaactttagatccagaagctact
ggagttcttctggtttgtattggaaaagctacaaaaattatagattatataatgaattca
agaaaagtgtatgaagttaaatttttacttggtactaagacgactacatatgatcttgag
ggtgaaattatagaacagaaagaaacatctcatcttagagatgaggaagtatttaatgta
actttatcttttgttggagaatatgatcaagttccaccaatgtactctgcccttaaaaag
aatggcgtaagactatatgatttagcaagacaaggtattgaggtagaaagagaagctaga
agaattaatatatttgacatatctaatttggaaataaatttaccgtatgtatcaatgaaa
gtagtttgttctaaagggacatatataagaagtttatgttatgatattggggaaaagcta
aatgttggagcaacaatggtagatttaaatagatgtgaaacatctatatttaaacaagag
gaaagtgtaaatatagaagagttaacaaaagaaaacataaaggattatataataactatt
gaggaggctcttgcattttatccaaaactcacagtaaaaagttcatttaccaaactttta
gtaaacggcgtaaaggtatttgataaaaggttaagtagtgagaaaagagaaaaaaatgtt
ttatatagagtttatgatacagaagaaacctttataggacttggaaaacaagatgatgaa
ggttttaaaattgagaaattattgctgtaa
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