Clostridium saccharobutylicum: CLSA_c14530
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Entry
CLSA_c14530 CDS
T02876
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csb03009
]
CLSA_c14530 (rimO)
Enzymes [BR:
csb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLSA_c14530 (rimO)
Ribosome biogenesis [BR:
csb03009
]
Prokaryotic type
ribosomal protein modification factors
CLSA_c14530 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AGX42453
UniProt:
U5MPM9
LinkDB
All DBs
Position
1627058..1628452
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AA seq
464 aa
AA seq
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MNGNNIEIVKDQIRVKANHDKYKVGMVSLGCDKNRVDSEIILGNMSTEYEITNNPKNADI
IIVNTCGFIESAKQESIDTILEMAEYKNSYKCKLLIATGCLTQRYGEELGQLIPEIDLML
GVNDYNKINEFITQFIQGNKMAEELLGYSDENINEGKRILTTQKETAYIRIAEGCNNFCT
YCIIPKIRGKFRSRRIENIINEAKELSNAGVKELILIAQDTTLYGSDIYNKKSLHILLQE
LSKVEGIKWIRVLYCYPEEIYDELIDEIANNDKVVKYLDLPIQHISDHILKLMGRKTTKQ
TILGKIDKLRQRIPGMIIRTTFIVGFPQETQEDFNEIKDFLKEYKLDKVGVFTYSQEEDT
PASKMDGQISEEVKKNREETLMLLQKDISEELNKLKIGKLYDILVEGYDGECYMGRSYEM
APDIDANVFFKSLDSIEIGTFIRVKITKNMDYDLVGVVVDEPCK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggaaataatatagaaattgtaaaagatcaaataagagttaaggctaatcatgat
aaatataaagtgggaatggtaagtttaggatgcgataaaaatagagtggattcagaaata
atactaggtaacatgagtactgaatatgagataactaataatcctaaaaatgcagatata
attatagtaaatacatgtggatttatagaaagtgctaaacaagaatctatagatacaata
ctagaaatggcagaatataaaaattcttataaatgtaaattgcttatagctacaggatgc
cttacacaaaggtatggcgaagaattaggtcaattaatacctgaaatagatttaatgctt
ggtgttaatgattataataaaataaatgagtttataacacaatttatacaaggaaataaa
atggcagaagaacttttgggttattctgatgaaaatataaatgaaggaaagagaattctt
acaacacaaaaagagactgcttatattagaattgcagaaggatgtaacaatttttgtaca
tattgtataattcctaaaattagagggaaatttagaagtagaagaattgaaaatataata
aatgaagccaaagaactaagtaatgctggagttaaagaattaattcttatagctcaagat
acaactttatatggtagtgatatatataataaaaagagtcttcatatattattacaggaa
ttatctaaagttgaaggaataaagtggataagagtactctattgctatcctgaagaaatt
tatgatgaacttatagatgaaattgcaaacaatgataaagttgtaaaatacttagattta
ccaatacaacatataagtgatcatattttaaaacttatgggaagaaaaactactaagcag
actatattaggtaaaatagataagcttagacaaagaattccaggaatgataataagaact
acttttattgttggttttcctcaagaaactcaagaggacttcaatgaaattaaggatttt
ctaaaagaatacaaacttgataaagtaggggtgttcacttattcacaagaagaagatact
ccagcttctaaaatggatggacaaatatccgaagaagtaaagaaaaatagagaagaaaca
ttaatgttattacaaaaagatatatcagaagagttaaataaattgaaaattggaaagtta
tatgatattcttgttgaaggatatgatggagaatgttatatgggaagaagttatgagatg
gcaccagatattgatgcgaatgtattctttaaatcattagacagcatagaaattggcaca
tttattagagtgaaaataacaaaaaatatggattatgatttagtaggagttgttgttgat
gaaccttgcaaataa
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