Clostridium saccharobutylicum: CLSA_c21420
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Entry
CLSA_c21420 CDS
T02876
Symbol
lsrD
Name
(GenBank) autoinducer 2 import system permease protein LsrD
KO
K10557
AI-2 transport system permease protein
Organism
csb
Clostridium saccharobutylicum
Pathway
csb02010
ABC transporters
csb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLSA_c21420 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLSA_c21420 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csb02000
]
CLSA_c21420 (lsrD)
Transporters [BR:
csb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CLSA_c21420 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
MFS18
Motif
Other DBs
NCBI-ProteinID:
AGX43122
UniProt:
U5MUK4
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All DBs
Position
2426592..2427641
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AA seq
349 aa
AA seq
DB search
MKEKFKKDHLKFKFRWEYFLILFIIAEVFIFGSMNPKFLMPRVLFGSFNDFISICIISIF
MCFVFITGGIDLQAGSIVGLSSIIIGVTWKNMGISIVTACAIAVFIGCLCGALSGFFVAF
TNVQPMVITLGGSFLYSGLAIAVSNMSNTAAYLGISGFPESFTAFTQKRFLGIIPSQVLI
FIALAVIAYIILHGTKYGRQIFLCGINKRAAEFSGINAKAIIMSTYIFSGMAASFAGIIM
TSYLGSSKADFGSDLTMPIITAVILGGTSTLGGKGGVLGTALAAVVIGIMRFGLSMNGLS
NQYLDIPVGIMLVVVVAASTASKNQKINSFIQQHFNFKQKLNNKAQSNK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaatttaaaaaagatcatttgaaatttaaatttcgttgggagtatttccta
atactattcattattgcagaagtatttatatttggctccatgaaccctaagttcttaatg
ccacgtgttttatttgggagttttaatgattttatttctatttgcatcatttcaatattt
atgtgctttgtatttattactggcggtatagatttacaggctggttctattgtaggttta
agttctatcataattggtgttacgtggaagaacatggggataagtatagtcacagcttgt
gcaattgctgtattcattggttgtttatgtggtgcattaagtggattctttgtagcattt
actaatgtacagccaatggtaataacacttggaggatcgtttttatattctggacttgct
attgcagtatcaaatatgtcaaatacagctgcttatctcggtataagtggatttccagaa
tcatttacagcttttacacaaaaacgattcttaggaataataccttcacaagttttaatt
tttattgcacttgctgttattgcttatattattcttcatggcacaaaatacggaagacaa
atattcctttgtggtattaataagcgcgcagcagaattttctggtataaatgcaaaagcg
attatcatgagtacttatattttttcaggtatggcagcatcttttgcaggaatcattatg
acaagctatcttggttcttcaaaagctgatttcggtagtgatttaacaatgccaattatt
acagcagtaatattaggtggtacttctaccttaggaggcaaaggaggagttttaggtact
gcactagcagctgttgtaattggaattatgagatttggactttctatgaatggactatca
aatcaatatctagatattccagtaggtataatgctagttgttgtagttgcagcaagtact
gcttctaaaaatcaaaagattaattcattcatacagcagcattttaattttaaacaaaaa
ttaaataataaggcacaatcaaataaataa
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