Clostridium saccharobutylicum: CLSA_c21430
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Entry
CLSA_c21430 CDS
T02876
Symbol
lsrB
Name
(GenBank) autoinducer 2-binding protein LsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
csb
Clostridium saccharobutylicum
Pathway
csb02010
ABC transporters
csb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLSA_c21430 (lsrB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLSA_c21430 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csb02000
]
CLSA_c21430 (lsrB)
Transporters [BR:
csb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
CLSA_c21430 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
SU10_portal
ATG101
Motif
Other DBs
NCBI-ProteinID:
AGX43123
UniProt:
U5MRH9
Structure
PDB
PDBj
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All DBs
Position
2427738..2428838
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AA seq
366 aa
AA seq
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MKKKAVALALIGAMIFTTLVGCGSSNTTTDTSTNSSKKGNVTVTFIPKLTGNAFFESANK
GAQKYSEQWGFKVDYEGDANASAASQVSVINKAVQQGTNAICLSSVDAAGVKDALKAAAD
AGVTVTTWDSDVDPSVRKVMVSQGTPEQLGQMLVQMGYDSLKERGKDPEKDAIKYCWHYS
NATVTDQNSWQVEGEKYIKSKYPNWQNVAPDNYYSNQDAEQAISVGESILSAHSDIDLII
CNDSTALPGQAQAAQNKGLTAKNVTITGFASPNSMKQYCNDGILTRWGLWDCGIQGAMGC
YMAYYIASGNSVKVGDKIEIPTVGTVEVMPNSVLDPKADDSDTSSGVVLLPERTIFTKDN
MNNYDF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaagctgttgcattagcacttattggtgcaatgatattcactacacttgtt
ggttgtggttcaagcaatactacaacagatacatcaactaacagttctaaaaaaggaaat
gttactgtaacatttattcccaaacttacaggtaatgcattttttgaatctgctaataaa
ggagctcaaaagtattctgaacaatggggattcaaagttgattatgaaggtgatgctaat
gcatctgcagcttcacaggtttctgtaattaataaagcagttcaacaaggtactaatgct
atttgtttatcatctgttgatgctgctggtgttaaagatgcacttaaagcagcagctgat
gcaggtgttacagttactacatgggattctgacgtagatccatcagttcgtaaagttatg
gtttctcaaggaactcctgaacaattaggtcagatgttagttcaaatgggctacgattca
ttaaaagaacgtggcaaagatcctgaaaaagatgctatcaaatattgctggcattattca
aatgcaacagttactgatcaaaattcatggcaggtagaaggggaaaaatatataaaatca
aaatatcctaattggcaaaatgttgcaccagataactattattcaaatcaagatgctgaa
caagctatttctgttggtgaatctatattgtctgcacattctgatattgacttaattata
tgtaatgattctacagcacttcctggacaagctcaagcagctcaaaataaaggattaaca
gctaaaaatgttactatcactggttttgcgtcacctaattcaatgaaacaatactgcaat
gatggaatcttaactcgctggggtctatgggattgtggtattcaaggtgctatgggatgt
tatatggcatactatattgcttctggtaactcagtaaaagttggagataagattgaaatt
cctactgtaggaactgtagaagttatgccaaatagtgtacttgatcctaaagcagatgat
tcagatacttcttcaggagttgtattacttccagaaagaactatatttacaaaagataat
atgaacaattatgatttctaa
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