Clostridium saccharobutylicum: CLSA_c21660
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Entry
CLSA_c21660 CDS
T02876
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03420
Nucleotide excision repair
csb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSA_c21660 (uvrD)
03430 Mismatch repair
CLSA_c21660 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c21660 (uvrD)
Enzymes [BR:
csb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSA_c21660 (uvrD)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSA_c21660 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CLSA_c21660 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AGX43145
UniProt:
U5MRB6
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All DBs
Position
2456670..2459246
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AA seq
858 aa
AA seq
DB search
MSTINIQDLFKKVNFKPNDAQYKAIVDVNQPLYLVAGPGSGKTRVLLWRVVNLIVFHNVK
IEEIFLSTFTEKAAMQLKEGLMWLLGLATQENKIHYDISDMYVGTVHSLCQKFILDNRFK
NNFKKKLPVILQELDQYFHIYDSLNKAKKELNLPEDYNECLKEYMCLKSSSKHEIVSCLI
SVFNRFSEESLSADEVIYNADNDVMIMLGNLYKFYLESLNSGRKKIDLSLLQQYGYKVLL
KSENSGEIFKHVIIDEYQDTNNIQEKIFFKLSGKYKNICVVGDDDQSLYRFRGATVENFV
QFDKKCESILGIKPQKIKLNINYRSRKRIVDFYKNFMEKEIWESQSQKGMYYRNVDKNIK
AFSKDDGISVVTTICDKAVNVYNEIAKKIKEMIDKKIISDPSEIAVLFTYLKGNQNVQRL
KEAFERFDLKVYAPRAGKFLENEEPMAVFGLYLNVFGIPYIDERYNYGRNKKFNDWMEKC
YQFGIELIEDDFDLKNFIEKIKEQLTKLKNDYGVIKEYMSENNINIDDNIDDIYKFDKFK
RGTMSLLSNLGKYKIQKKSVRIIIEKKIKEDKKINYRWLVTRINSVNWNLLDLFYKLCKF
EYLKCIFDEAENMCDEGPMYNLSNVTTYIQFFIENKISLITGKNLYEDRFMRTFFTSYLG
AIFRREEGNYEIKDEPIPKGRISFLTIHQSKGLEFPVVILGAIPPCKNRNGKNRIEEIIR
PYLKGEYEPLEKVLEFDRMRSYYVALSRAENLLILPHFKGTAIHPYFKDDLKCGAIPLLD
NLDIDSIPKKVIKESFATKVYSYTSDFLFYNECPRKYMIYKKYGFVPARTTISFFGNLVN
KTLEDIHNYYISLGNEAE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaattaatatacaagatttgtttaagaaagttaattttaaaccaaatgatgca
caatacaaagcaattgtagatgttaatcagccattatatttagttgcaggaccaggttca
ggaaagacaagagtgcttttatggagagttgttaatttaattgtttttcataatgtaaaa
atagaagagatatttttaagtacatttacagaaaaagcagctatgcagctaaaagaagga
ttaatgtggttacttggattagctactcaagaaaataaaatacattatgatatttcagat
atgtatgtggggacagttcattcattatgtcaaaagtttattttagataatagatttaaa
aataattttaaaaaaaagctgcctgtaatattgcaagaattagatcaatattttcatata
tatgatagtttgaataaagctaaaaaagaattgaatcttccagaggattataatgaatgt
cttaaagaatatatgtgtttaaaatcttcaagcaaacatgaaatagtttcttgtcttatt
tcagtatttaataggttttcggaagaaagcttatctgcagatgaagtaatttataatgca
gataatgatgtaatgataatgttaggtaatttatataagttttatttggaaagtttaaat
tcaggaagaaaaaaaatagatctttcattattacagcaatatggatataaggttctttta
aaaagtgaaaatagtggggaaatatttaaacatgtaattattgatgaatatcaggataca
aacaatattcaagaaaaaattttctttaaattatctggcaagtataagaacatttgtgtt
gtaggtgatgatgatcaatcgttatatagattcagaggggcaactgttgaaaactttgtt
caatttgataaaaagtgcgagagtattttaggtataaaaccacaaaaaataaaacttaac
ataaattatagatctagaaagagaattgttgatttttataagaattttatggaaaaggag
atttgggaaagtcaatctcaaaaaggcatgtattacagaaatgtagataagaatataaaa
gcatttagtaaagatgatggaatatcagtggttactacaatatgtgataaagctgttaat
gtatataatgaaattgcaaaaaaaattaaagaaatgattgataaaaaaataatatctgat
cctagtgagatcgctgttttatttacttacttaaagggaaatcaaaatgttcaaagatta
aaagaagcttttgaaagatttgatttaaaggtatatgcacctcgtgcaggaaagttttta
gaaaatgaagaacctatggctgtatttggtttatatttaaatgtatttgggattccatat
attgatgaacgctataattatggaaggaataaaaagtttaatgattggatggaaaaatgt
tatcaatttggtatagaacttatagaagatgattttgatttaaaaaattttatagaaaag
ataaaagaacaattaaccaaattaaaaaatgattatggtgttattaaagaatatatgtct
gaaaacaatataaatattgatgataatattgatgatatatataaatttgataagtttaaa
agaggaactatgagtttattatctaatttaggcaaatataaaattcagaaaaaatctgtt
cgtataattatagagaaaaagataaaggaagataaaaaaattaattatagatggttagta
acaagaataaattcggtaaactggaatctactagatttattttataagttgtgtaaattt
gagtatttaaaatgtatttttgatgaagcagagaatatgtgtgatgaagggccaatgtac
aatttatcaaatgtaactacttatattcaattttttatagagaacaaaatatcattaata
acaggaaaaaacttatatgaagatagatttatgagaacgttttttacttcttatttagga
gcaatatttagaagagaagaaggaaattatgaaataaaagatgaaccaatacctaaaggt
agaatatcatttttaactatccaccaatctaaaggacttgaattcccagtagttatttta
ggagccattcctccatgcaaaaacagaaatggtaaaaatagaattgaagaaataattagg
ccttatttgaaaggagaatatgagccattagaaaaagtattagagtttgacagaatgaga
agttattatgttgctttatctagagctgaaaatcttttaatattacctcattttaaagga
acagctatacacccatattttaaggatgatttgaaatgcggagctataccattgttagat
aatttagatattgattcaattcctaaaaaagttattaaggaaagttttgcaactaaagtg
tattcatatacatcagatttcttattttataatgaatgtccaagaaagtatatgatttat
aaaaaatatggttttgttcctgcaagaactactatatctttctttggaaatcttgttaat
aaaacgctagaagatattcataattattatataagtttaggaaatgaggctgaatga
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