Clostridium saccharobutylicum: CLSA_c26850
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Entry
CLSA_c26850 CDS
T02876
Symbol
ispA
Name
(GenBank) farnesyl diphosphate synthase IspA
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00900
Terpenoid backbone biosynthesis
csb01100
Metabolic pathways
csb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CLSA_c26850 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csb01006
]
CLSA_c26850 (ispA)
Enzymes [BR:
csb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CLSA_c26850 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CLSA_c26850 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CLSA_c26850 (ispA)
Prenyltransferases [BR:
csb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CLSA_c26850 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3180
Motif
Other DBs
NCBI-ProteinID:
AGX43656
UniProt:
U5MVI6
LinkDB
All DBs
Position
complement(3015793..3016662)
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AA seq
289 aa
AA seq
DB search
MEINNIRKDINEYLENYFKEKGTYNKVIYDSSSYSLNIGGKRIRPILFALSYFIYREEYK
SIMPMACAMEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGENIAVLAGDNLLNEAMIL
MMNYSLKNGGNSLRAAYEIAKAAGAEGMIGGQVVDIISEGKEISKEELEYMHSKKTGALI
KASILGGAILAGAPERDLEYLEKYGEKLGLVFQIKDDILDVVGDIKALGKNVHADEEHNK
TNFITVYGLEKCQELCSKLTEECVTILRTLTVDAECLVELTYSLLNREN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggagataaataatataagaaaagatattaatgaatatctagaaaattattttaaggaa
aaaggaacttataataaagttatatatgattcatcaagttatagcttaaatataggtgga
aagagaattcgtcctatattatttgcgttatcttattttatatacagagaagaatataaa
tctattatgccaatggcttgtgctatggaaatgattcatacatattctttgattcatgat
gatcttccatgtatggatgatgatgatttaagacgtggtaagccaaccaatcacaaggtt
tatggagaaaacatagcagtgcttgcaggtgataatctgttaaatgaagcaatgatactt
atgatgaattattccttgaaaaatggtggaaattccttaagagcagcttatgaaatagca
aaagctgcaggggcagaaggaatgataggtggtcaagtagttgatattatttcagaagga
aaggaaatttcaaaagaagaattggaatatatgcattcaaagaaaactggagctttaata
aaagcatccatcttaggcggagcaatattagcaggtgcaccagaaagagacttagaatat
ttagagaaatacggcgaaaagctaggattggtttttcaaattaaagatgatatattagat
gttgtaggcgatataaaagcattaggaaagaatgtgcatgcagatgaagaacacaataag
actaattttataacagtatatggtttagaaaaatgtcaagaattatgttcaaagttaaca
gaagaatgtgtaacaatattgagaacattaactgtagatgcagaatgtttggttgaattg
acttacagtcttttaaatagagaaaattaa
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