Clostridium saccharobutylicum: CLSA_c26870
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Entry
CLSA_c26870 CDS
T02876
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CLSA_c26870 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c26870 (xseA)
Enzymes [BR:
csb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CLSA_c26870 (xseA)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CLSA_c26870 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGX43658
UniProt:
U5MSZ8
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All DBs
Position
complement(3017012..3018220)
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AA seq
402 aa
AA seq
DB search
MNIKTLTVSEVTNYIKRMLDNDFILNNLSVKGEISNLKYHSSGHIYFSLKDDNGKVNCVM
FKGNALFLDFVLEEGMEVIVKGRASIYPATGSFQLYCDEIKKEGQGELFVKFEKLKQKLS
KMGYFDEGHKKILPKYPQRIGVVTSPTGAAIRDIINVSTRRSSLVDIVLYPAKVQGIDAY
KEVIEGIKYFNNNKSVDIIIVGRGGGSIEELWNFNEEELAKAIYISKIPIISAVGHEIDY
TISDFVADVRAATPSQGAEIAVPLSKDIEEKVCDISKALEINIDNKLKSCKNELSNAERI
LKIHSPITRIANSYLEIDNLKNRLNFLMKIKVEKEKKQLENLNNLLLAYNPVKVISKGYA
IIQDDEKNLITSKEQMENPINLEISVKDGKAEGKFIPLKHIK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaaactttaactgtttcagaggtaacgaattacataaaaagaatgttagac
aatgatttcattttaaataatctctctgtaaaaggggagatttctaatttaaaatatcat
agtagtgggcatatatatttttcacttaaagatgataatggaaaagtaaattgtgtaatg
tttaaaggaaatgctctctttttagattttgtattagaagaaggtatggaagtcattgtt
aaaggcagagcgtctatatatcctgccacaggaagctttcagctttattgcgacgaaata
aaaaaagaaggacagggagaattatttgttaaattcgaaaaacttaaacaaaaattatca
aagatgggttatttcgatgagggtcataaaaaaatattgcctaaatatccacaaagaata
ggtgttgtaacatcaccaactggagctgctattagagatattattaatgtttcaacgaga
aggagcagtttagttgatattgtgttgtatccagctaaagttcaaggtattgatgcgtat
aaagaagtaattgaaggaataaaatattttaataataataagtctgttgacataataata
gttggcaggggcggtggttccatagaggaattatggaactttaatgaagaagagttagca
aaagctatttacatttctaaaatacctataatatctgctgtaggacatgaaatagattat
accatttcagattttgtagctgatgttagagctgcaactccgtctcagggagctgagata
gcagttcctttaagtaaagatattgaagaaaaagtttgtgatatatctaaagcattagaa
attaatatagataataaattaaaatcatgtaagaatgaattaagcaatgcagaaagaata
ttaaaaattcattcgccaataactagaatagcaaattcgtatctagaaatagataattta
aaaaatagattaaactttttaatgaaaataaaagttgaaaaagaaaagaagcaactagaa
aatttaaataatttacttttagcatataatcctgttaaggttatttcaaaaggatatgct
ataatacaagatgatgaaaaaaatctaattacgtcaaaagaacagatggaaaacccaatt
aatttagaaattagtgttaaggatggaaaagcggaaggaaaatttataccattaaagcac
ataaaataa
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