Clostridium saccharobutylicum: CLSA_c27140
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Entry
CLSA_c27140 CDS
T02876
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00300
Lysine biosynthesis
csb00470
D-Amino acid metabolism
csb01100
Metabolic pathways
csb01110
Biosynthesis of secondary metabolites
csb01120
Microbial metabolism in diverse environments
csb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CLSA_c27140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLSA_c27140 (dapF)
Enzymes [BR:
csb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CLSA_c27140 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
DUF4396
Motif
Other DBs
NCBI-ProteinID:
AGX43685
UniProt:
U5MSW6
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Position
complement(3037295..3038122)
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AA seq
275 aa
AA seq
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MNFYKMQGAGNDFVFIEDFNNEIEDECRLAEKLCDRHFGIGADGLVIVRKSEVAQAKMVI
INADGSRANMCGNAIRCFGKYVYEHNIANSTKFSVETGDGVKEIEIILEDANVKYVKVYM
GNPSYDGHDIPLNNLDSLIDTDIIVDNKTYRVTTVLMGVPHTVIFGNDRDYDAIGEGSKI
EKFHLFKEGSNINFVKVIDKTHIRVDTWERGAGATLACGTGCSASVVVAKRLGLVDKDKE
IYVKAPGGELIIDVQGNDVYMKGPAEVTFEGTTNL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttataaaatgcagggagcaggaaatgattttgtatttattgaggattttaac
aatgaaatagaggatgaatgtagattggctgaaaagctttgtgatagacattttggtatt
ggagctgatgggttagtcatagttagaaaatcagaagttgcacaggctaagatggttata
ataaatgcagatggctcaagagctaatatgtgtggaaatgctataagatgttttggaaaa
tatgtttatgaacacaatatagctaacagcactaaattttctgttgaaactggagatggc
gttaaggaaattgaaataatattagaagatgcaaatgtaaaatacgtaaaagtatatatg
gggaatccatcttatgatggacacgatatacctttaaataatttagacagtcttattgat
actgatattattgtagataataaaacttatagagttactacagtactaatgggtgtgcct
catactgttatttttggaaatgatagggattatgatgctataggagaaggttcaaagata
gaaaagtttcatctatttaaagaaggaagtaatataaattttgttaaagtaatagataaa
actcatataagagttgatacgtgggaaagaggagcaggagcaacacttgcttgtggaact
gggtgttctgcatcagtagttgtagcaaaaagattaggacttgtagataaggataaagaa
atatatgttaaggcaccaggtggagaacttattatagacgttcaaggaaatgatgtatat
atgaaaggcccagcagaagtgacttttgagggaacaacaaatttgtaa
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