Clostridium saccharobutylicum: CLSA_c27950
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Entry
CLSA_c27950 CDS
T02876
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase GlyA
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00260
Glycine, serine and threonine metabolism
csb00460
Cyanoamino acid metabolism
csb00630
Glyoxylate and dicarboxylate metabolism
csb00670
One carbon pool by folate
csb00680
Methane metabolism
csb01100
Metabolic pathways
csb01110
Biosynthesis of secondary metabolites
csb01120
Microbial metabolism in diverse environments
csb01200
Carbon metabolism
csb01230
Biosynthesis of amino acids
csb01240
Biosynthesis of cofactors
csb04981
Folate transport and metabolism
Module
csb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CLSA_c27950 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CLSA_c27950 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLSA_c27950 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CLSA_c27950 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CLSA_c27950 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CLSA_c27950 (glyA)
Enzymes [BR:
csb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CLSA_c27950 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
AGX43764
UniProt:
U5MSH6
LinkDB
All DBs
Position
complement(3126762..3127997)
Genome browser
AA seq
411 aa
AA seq
DB search
MNFENIQREDKEIYDLIEEELKRQQKGIELIASENIVSPAVMEAMGSYLTNKYAEGYPGK
RYYGGCHVVDKIEQIAIDRAKQLFGAEHANVQPHSGSQANMAVYFTVLEPGDTVLGMDLS
HGGHLTHGSPVNFSGKLFNFVSYGVDKETEMIDYENVRKIALECKPKLIVAGASAYARTI
DFAKFREIADEVNALLMVDMAHIAGLVAAGVHPSPVPYCDFVTTTTHKTLRGPRGGLILC
KEKYAKDLNKNIFPGIQGGPLEHIIAAKAVCFKEALDPSFKTYATNVVENCKELAAQLIS
KGFKIVSGGTDNHVFLVDLNNKDITGKEAEQLLDSVGITANKNTVPNETRSPFVTSGIRI
GTAAITTRGFVKEDMAEIAAIIDEAISNREGDLSQLKVRVEALCDKHPLYK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaaacatacaaagagaagataaagaaatttatgatttaatcgaagaagaa
ttaaaaagacaacaaaagggaattgaattaatagcttcagagaatattgttagtccagca
gttatggaagctatgggttcatatttaactaataaatatgctgaaggatatccaggtaaa
agatattatggaggctgtcatgtagttgataaaatagaacaaattgcaattgatagagct
aaacaattatttggagcagaacatgcaaatgttcaacctcattcaggttcacaagctaat
atggctgtatactttacagtattagaaccaggagatactgtacttggtatggatttaagc
catggtgggcatttaactcatggttcaccagttaacttttcaggaaaattattcaacttc
gtttcttatggagtagataaagaaactgaaatgattgattatgaaaatgtaagaaaaatc
gcgttagaatgtaaaccaaagcttatagtagcaggtgctagtgcatatgcaagaactatt
gattttgctaaatttagagaaatagcagatgaagttaatgcattacttatggtagatatg
gctcatattgcaggattagttgctgcaggtgtgcatccatcaccagtaccatactgtgac
tttgtgacaacaacaactcataagactttaagaggtccaagaggtggattaatactttgt
aaggagaaatatgctaaggatctaaacaaaaacatattccctggaatacaaggtggtcca
ttagaacatattatagcggctaaagctgtatgttttaaagaagctttagatccaagtttt
aagacatatgcaactaatgtagttgaaaattgtaaagaacttgcagctcaattgatttca
aaaggatttaaaattgtttcaggtggaacagacaatcatgtattcttagttgatttaaat
aataaagatataacaggaaaagaagcagaacaattattagactcagttggaatcactgca
aataagaatacagtaccaaatgaaacaagaagcccatttgtaacttctggaatcagaata
ggtacagcagcaataacaacaagagggtttgttaaagaagatatggctgaaattgcagct
attatagatgaagcaatttcaaatagagaaggagacttgtcacaacttaaagttagagta
gaagctttatgtgataaacatccattatataaataa
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