Clostridium saccharobutylicum: CLSA_c37670
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Entry
CLSA_c37670 CDS
T02876
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03030
DNA replication
csb03430
Mismatch repair
csb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSA_c37670 (polC)
03430 Mismatch repair
CLSA_c37670 (polC)
03440 Homologous recombination
CLSA_c37670 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csb03032
]
CLSA_c37670 (polC)
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c37670 (polC)
Enzymes [BR:
csb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSA_c37670 (polC)
DNA replication proteins [BR:
csb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLSA_c37670 (polC)
DNA repair and recombination proteins [BR:
csb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLSA_c37670 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DEDDh_C
Zn-ribbon_8
Rubredoxin
YhfH
Motif
Other DBs
NCBI-ProteinID:
AGX44728
UniProt:
U5MW04
LinkDB
All DBs
Position
complement(4155657..4159997)
Genome browser
AA seq
1446 aa
AA seq
DB search
MKKVNEIFSDYECDGNINTAVVQSVTLRKKTKVLEMEISSDKYIEMIELESFNEFIKQRF
SLNDSKIAIKYSDGINIRPIEDELKNIVLLLENKYPALKAVLNKSEYEVVGNAINFNFKV
PAAGFLKIMEYDKKINAIIKSFYGTQYKINFVDKISSEELEKMAEDRRAKEATFIKEIKS
TQSVTVSEPVKKEEEKKQEIKAEGDGKKGNPFLILGRSANIKDPIVKINDITPDEGRVAI
EGEISNIEAKELRSGKMLISFDLYDGSNSMTCKIFCKPTEYDQVFSRIKKAKGLRLVGNA
GYSNFSHEVELIANIVIETQGIKRIKRMDNAEVKRVELHMHTQMSQMDAMTSAGDLIKRA
MSWGMKSIAITDHGVVQSFPEAHKLLGRDNPDMKVIYGVEAYLAPDKKPSVTNIKGQSID
TTYCVLDLETTGFSPVTEKITEIGIMKVKDGKVIDKFSTFVNPKKPIPLRVVEVTNITDD
MVRNAETIDKVFPKMLEFIEGSVLVAHNAEFDINFLKHNARVLGHDFDFTYIDTLTLAQD
IFYDFKSYKLGRIAKNLGIKVEVAHRALDDVDTTVKVFNIMIEKLKERGAQTIEDIEVYA
CDEESKKVAYKKVKTYHAIILAKDYVGLKNLYKLVSYSHLDYFYKKPRILKSMYEKYSEG
LILGSACSEGELFKSILLGKSEEEIEKIASYYDYLEIQPLGNNDYLVRQEQVPNKDYLKK
INKKIIALADKLNKPVVATGDVHFMDPEDEIYRRIMEAAQGFKDADDQAPLYLRTTEEML
REFDYLGEEKAYEVVVTNTNKVADMCEQISPISPEKCPPHIDGCEQTIKDIAYEKAHELY
GDPLPEIVQARLDKELDSIIKNGFSVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVANMT
GITEVNALPPHYRCPKCKYSDFEDYGVLNGFDLPDKVCPVCGENLHKDGIDIPFETFLGF
NGDKEPDIDLNFSGEYQAKAHRYTEVIFGKGTTFKAGTIGTIAEKTAFGYVKKYYDERNR
PINKAETMRIAAGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQHPADDANSDIITTHFD
YHSIDQNLLKLDILGHDDPTVIRMLQDLTGVNPHEIPMDDKATMSLFFSTEALGVTPQQI
NSQVGTFGIPEFGTKFVRGMLVDTKPTTFADLLCISGLSHGTDVWLGNAKDLIDNGVITS
ISDAVCTRDDIMVYLIKKGLPPNTAFKIMETVRKGKALKEPKFPEYEAMMREHDVPEWYI
TSCKKIKYMFPKAHAAAYVMMAFRIAWFKVHIPKAYYATYFSIRAKAFDAEFMIFGKEKV
KAKMQEIQALGNDAGPKDKDMYDDLEIVLEMYERGIRFLPIDLYKSKATRFQVEEDGIRP
PINSISGMGNVAAEGIANAAKEKSFNSVDDVKKRSKIGNAAIDLLRKFDCLKGLPESDQM
SFFDGL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtaaatgaaatttttagtgattatgaatgtgatggaaatataaatactgcg
gttgtacaatctgtaactttgcgtaaaaaaactaaagttttagaaatggaaattagctca
gataaatacattgaaatgatagagcttgagagttttaatgagtttataaagcaaagattt
tcattaaatgattctaaaatcgctataaagtatagtgatggaataaatataagacccata
gaagatgaattaaaaaatattgtattgctattggaaaataagtatcctgctttaaaggca
gtgctgaataaaagtgaatatgaagtagttggaaatgctataaattttaattttaaggtt
ccagcagcaggttttttgaaaatcatggaatatgataaaaaaataaatgcgattataaaa
agtttctatggtactcaatataaaataaactttgttgataagataagcagtgaagaatta
gaaaagatggcagaagataggcgtgcaaaggaagctacgtttataaaagaaattaaaagc
acacaaagcgtgactgtttctgagccagttaaaaaagaggaagaaaagaaacaggaaata
aaagccgaaggtgatggaaagaaaggaaatccattcttaattttaggtagaagtgctaat
attaaggaccctatagtgaagattaatgatataacacctgatgaaggaagagtagctata
gaaggggaaatatcaaatatagaagcaaaggaattaagaagtggaaaaatgttaatttcc
tttgatttatatgatggttcaaattccatgacttgtaaaatattttgtaagcctactgaa
tatgatcaagtattctctagaattaaaaaagctaaaggacttaggcttgttggaaatgca
ggttatagtaatttctctcatgaagttgagcttattgctaatattgtaattgagacacaa
ggaattaagagaattaagaggatggataatgcagaagttaagagagttgaacttcatatg
catacacaaatgagtcagatggatgcaatgacaagtgctggtgatctcattaaaagagcc
atgagctggggaatgaaatcaatagctataactgatcatggagtggttcaatcatttcct
gaagcacataagcttcttggaagagataatccagatatgaaagttatatatggagttgaa
gcttatttagccccagataaaaagccatctgtaacaaatatcaagggacaaagtattgat
acaacatattgtgttctagatttagaaactacaggattctctccagtaacagaaaaaatt
actgaaataggaatcatgaaagtcaaggatggaaaggtaatagataaatttagtacattt
gtaaatcctaaaaagccaattccattaagagttgttgaagttaccaatataactgatgat
atggtaagaaatgctgaaactatagataaggtatttcctaaaatgcttgagtttattgaa
ggaagtgttttagttgctcataatgctgaattcgatattaactttttaaagcataatgca
agagttttaggtcatgactttgatttcacttatatagatacattgactttagcacaagat
attttctatgattttaaatcttataaattaggaagaattgctaagaatcttgggataaag
gtggaggttgctcatagagctctagatgatgttgatacaactgttaaggtgtttaacata
atgattgaaaagcttaaggaaagaggagcacaaactattgaggatatagaagtatatgct
tgtgatgaggaatctaagaaggtagcatataagaaagttaaaacttatcatgcaataata
ttagcaaaggattatgtaggattaaagaatttgtataagcttgtatcatattctcatttg
gattatttctataaaaagccacgtatattaaagagtatgtatgaaaaatattctgaaggt
ttaatccttggtagtgcgtgtagtgaaggtgaattgtttaaatcaattctcttagggaaa
tcagaagaggaaatagaaaagattgcaagttactatgattatttagaaattcagcctcta
ggaaataatgattatttagtaagacaagagcaagtgccaaataaagattacctaaagaaa
attaataagaaaattatagcactagcagacaaattaaataaacctgtagttgcaacaggc
gatgttcatttcatggatcctgaagatgagatatatagacgtataatggaagcggcgcaa
ggatttaaagatgcagatgatcaagcgccattatatttaagaacaactgaagagatgctt
agagaatttgattatttaggagaagaaaaagcttatgaggttgtagttacaaatactaat
aaggtagcagatatgtgtgagcaaattagtcctatttcaccagagaagtgtccaccgcac
atagatggttgtgagcagacaattaaagatattgcatatgaaaaggcacatgaactgtat
ggagatcctcttccagaaatagttcaggctaggcttgataaagagctggattcaattata
aaaaatggattctcagtaatgtatatcatcgctcaaaagctggtatggaaatcaaatgaa
gatggatatttggtaggatccagaggatcagttggttcttcttttgtagcaaacatgact
ggtataacagaagtaaacgcacttcctcctcattatagatgtcctaaatgtaaatattcg
gattttgaagattacggtgttttaaatggtttcgatttacctgataaagtatgccctgtt
tgtggtgaaaatcttcataaggatggaatagatataccatttgaaacattcctaggcttt
aatggagataaagagcccgatatagatttaaacttctcaggagaatatcaggcaaaagcc
catagatatacagaagttatctttggtaagggtacaacatttaaagctggaaccataggt
actatagcagaaaaaacagcctttggttatgtgaagaagtattatgatgaaagaaaccgt
ccaataaacaaggcagaaacaatgagaatagcagcaggttgtacgggtataaaaagaact
actggacagcatccaggaggaataatagttgttccaaaaggacgtgaaatatttgaattt
tgtccagtgcagcatccagcagatgatgctaattcggatattataacaacacactttgat
tatcactctattgaccagaaccttttgaagctggatatactagggcacgatgatccgaca
gttataagaatgcttcaagatttaacaggggttaatccacatgagatacctatggatgat
aaggcaactatgtctttattcttctctacagaagctcttggggtaactccacagcagata
aattcgcaggtaggaacgtttggaatacctgagtttggtactaagttcgttagaggaatg
cttgtagatacaaagccaacaacttttgcagatttgttatgtatatcaggactttctcat
ggtacagatgtatggcttggaaatgctaaggacttaattgacaatggagtaattactagc
ataagtgatgccgtatgtacaagagatgatattatggtttatttaattaaaaaaggactt
ccacctaatactgcatttaaaataatggaaactgtccgtaagggtaaagcattaaaggaa
cctaaattcccagaatatgaagcaatgatgagagagcatgatgtgccagaatggtatata
acatcatgtaagaagataaaatacatgttccctaaggcccatgctgcagcttatgtaatg
atggccttcagaatagcctggtttaaggttcatatacctaaagcttattatgcaacatat
tttagtattagagcaaaggccttcgatgcagaatttatgatttttggaaaagaaaaagtt
aaggcaaaaatgcaggaaattcaagctcttggaaatgatgcaggtcctaaggataaggat
atgtatgatgatttagagatagttcttgaaatgtacgagagaggaattagattcctgcca
attgatttgtataaatctaaggctacaagatttcaagttgaagaggatggaataagaccg
ccgataaacagtatatcaggtatgggaaatgtggctgcagaaggtatagctaatgctgct
aaagaaaaatcatttaattccgtagatgacgtaaagaaacgttctaaaataggaaatgca
gctatagatttactaagaaaatttgactgcttaaagggacttcctgaaagtgatcagatg
agcttttttgatggactttag
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