Clostridium saccharobutylicum: CLSA_c42250
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Entry
CLSA_c42250 CDS
T02876
Symbol
rfbB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase RfbB
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb00521
Streptomycin biosynthesis
csb00523
Polyketide sugar unit biosynthesis
csb00525
Acarbose and validamycin biosynthesis
csb00541
Biosynthesis of various nucleotide sugars
csb01100
Metabolic pathways
csb01110
Biosynthesis of secondary metabolites
csb01250
Biosynthesis of nucleotide sugars
Module
csb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLSA_c42250 (rfbB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLSA_c42250 (rfbB2)
01055 Biosynthesis of vancomycin group antibiotics
CLSA_c42250 (rfbB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLSA_c42250 (rfbB2)
00525 Acarbose and validamycin biosynthesis
CLSA_c42250 (rfbB2)
Enzymes [BR:
csb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLSA_c42250 (rfbB2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
KR
adh_short
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGX45185
UniProt:
U5MX62
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Position
complement(4718803..4719873)
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AA seq
356 aa
AA seq
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MKTYLVTGGAGFIGSNFVLYMLNKYQHIKIVNLDKLTYAGNLENLKSIQNDERHTFVQGD
ICDKELVSSLFEKYDVDYVVHFAAESHVDRSIKEPEVFAKTNVLGTVNMLNCAKNAWETK
DGFKQGVKFLHVSTDEVYGSLGAEGFFMETTPLDPHSPYSSSKASSDLMVKAYYDTYKMP
INITRCSNNYGPFQFPEKLIPLLINNCLKHKDLPVYGDGMNIRDWLFVEDHAKAIDMVIN
DGRLGEVYNVGGHNERTNIQIVKTVISYINENVDKEVTENLIKYVEDRKGHDKRYGIAPD
KIKEELGWYPETVFEVGIKKTIKWYLDNQEWMKNVTSGDYQKYYEKMYTNSTIPEA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatatttagttacaggcggagcagggtttataggatcaaactttgttttatat
atgttaaataaataccaacatattaaaatagttaacttagataaattaacttatgcagga
aacttagaaaatcttaaatcaatccaaaatgatgaaagacatacatttgttcaaggagat
atttgtgataaagaattagtttctagtctttttgaaaaatatgatgtagattatgttgtt
cactttgcagcagagtcacatgttgatagaagtataaaagaaccagaagtatttgctaag
acaaatgtacttggtacagttaatatgcttaattgtgcaaaaaatgcttgggaaacaaaa
gatggatttaaacaaggtgttaaattccttcatgtatcaacagatgaagtttatggttca
ttaggagcagaaggcttctttatggaaacaacaccattagatcctcacagtccatattca
tcaagtaaagcaagttcagatttaatggttaaggcttattatgatacatataaaatgcct
ataaatataactagatgttcaaataactatggaccattccaatttccagaaaagctaatt
ccattattaataaataactgtttaaaacataaggatttacctgtatatggtgatggtatg
aatataagagattggttatttgtagaagaccatgcaaaagcaatagatatggttattaac
gatggtagacttggagaagtttacaatgttggtggacataatgaaagaactaatattcaa
atagttaaaacagttatctcttatattaatgagaatgtagataaagaagtaactgaaaac
ttaataaaatatgttgaagatagaaaaggacacgataaaagatacggaatagctccagat
aaaataaaagaagagttaggatggtatcctgaaactgtttttgaagttggaataaaaaaa
actatcaaatggtatttagataatcaggaatggatgaaaaatgttacttctggtgattat
caaaagtattatgagaaaatgtacacaaattctaccattccagaggcctag
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