Clostridium saccharobutylicum: CLSA_c42960
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Entry
CLSA_c42960 CDS
T02876
Name
(GenBank) P-loop-containing kinase
KO
K06958
RNase adapter protein RapZ
Organism
csb
Clostridium saccharobutylicum
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csb03019
]
CLSA_c42960
Messenger RNA biogenesis [BR:
csb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CLSA_c42960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
DUF2380
Sigma_reg_C
AAA_33
AAA_22
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGX45256
UniProt:
U5N001
LinkDB
All DBs
Position
complement(4823763..4824647)
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AA seq
294 aa
AA seq
DB search
MRFVIVTGLSGAGKTQATRTLEDLGYFCVDNLPPKLISKFAEACTQSGGNIEKVALVIDI
RSGIFFDDFFETLKYLKQNEFKYEILFLEATDEVLIKRFKETRRSHPLSPDGRVLTGITE
EREKLREIKNVADIIVDTSKYEIRHLREKINEIYGDHVYPEKQLSITILSFGFKYGIPVD
SDLVFDVRFIPNPFYIPELKQYSGNDEPVKEYVLKQTETSTFIEKTIDMLKYLIPNYIKE
GKRQLIISIGCTGGRHRSVAIANEIYERLNKENYNSRIEHRDVAEDLHKGEKKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgttatagttacaggactatcaggagcaggaaaaacacaagcaaccagaaca
ttagaagatttaggctatttttgcgtagataatcttcctccaaaattaatttcaaagttt
gcagaagcatgtacgcaaagtggaggaaacattgaaaaagtagcattagttatagatatt
agaagtggcattttctttgatgatttctttgaaactttaaaatacctaaaacaaaatgaa
tttaaatatgaaattctatttttagaggcaacagatgaagtattaataaaaagatttaag
gaaacaagaagaagtcatccattgtcgcctgatggaagagttctaactggtattactgaa
gaaagagaaaagttaagagaaattaaaaatgtagcagatataattgttgatacatctaag
tatgaaataaggcacttaagagagaagataaatgaaatttatggtgatcatgtttatcca
gaaaaacaattatcaattaccatattaagttttggatttaaatatggaatacctgtagat
tcagatttagtatttgatgttagatttataccaaatccattttatatccctgaattaaag
caatactcaggaaatgatgaacctgttaaagaatatgtattaaaacaaactgagactagt
acatttattgaaaaaacaatagatatgctaaaatatttaatacctaattatattaaagaa
ggaaaaagacaattaataatatcaataggatgcacaggaggaagacatcgttctgttgct
attgctaatgaaatttatgaaagattaaataaagaaaactataacagtagaatagagcat
agagacgtggcggaagatcttcataaaggggaaaagaaactatga
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