Clostridium saccharobutylicum: CLSA_c43400
Help
Entry
CLSA_c43400 CDS
T02876
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLSA_c43400 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c43400 (ung)
Enzymes [BR:
csb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLSA_c43400 (ung)
DNA repair and recombination proteins [BR:
csb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLSA_c43400 (ung)
Prokaryotic type
CLSA_c43400 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGX45299
UniProt:
U5MWW7
LinkDB
All DBs
Position
4873685..4874362
Genome browser
AA seq
225 aa
AA seq
DB search
MSEILKNDWKNYLDSEFKKDYYIKLKKFLVNEYNSKVIYPNMYDLFNALHFTPYSKVKIV
ILGQDPYHGPNQAHGLSFSVNPGVKTPPSLINIYKELHTDLGCYIPNNGYLKKWADQGVL
LLNTVLTVRAGEANSHRNKGWEEFTTKVIQILNDKETPIVFILWGNNAISKEKLITNPKH
LIIKSVHPSPLSASRGFFGSKPFSKTNDFLIKTNQTPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatactaaaaaatgattggaaaaattatttagattccgaatttaaaaaagat
tactatattaaattgaaaaaattccttgtaaatgaatataattcaaaagtcatatatcca
aatatgtatgatctttttaatgccctacactttactccttattctaaagtaaaaatagtt
atattaggtcaagatccatatcatggtcctaatcaggcacatggattaagtttttctgtt
aatcctggagtgaaaacacctccatcattaataaatatttataaagaacttcatactgat
ttaggatgttatattcctaataatggctatctaaaaaaatgggctgatcaaggtgttctt
ttgttaaatacagttctaacagtaagagctggcgaagccaattctcatagaaataaaggt
tgggaagaattcactacaaaagtcatacaaatattaaatgataaggaaacacctatagta
tttatactttggggaaacaatgctatttcaaaagaaaaattaataactaatccaaagcat
cttattataaaatcagttcatcctagtccattatctgcttcaagaggtttttttggcagt
aaaccattttcaaaaacaaatgattttttaattaaaactaatcaaacaccaatagattgg
cagattgaaaacatctaa
DBGET
integrated database retrieval system
