Caldicellulosiruptor saccharolyticus: Csac_0158
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Entry
Csac_0158 CDS
T00506
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc02010
ABC transporters
csc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Csac_0158
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Csac_0158
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csc01002
]
Csac_0158
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csc02000
]
Csac_0158
Peptidases and inhibitors [BR:
csc01002
]
Cysteine peptidases
Family C39
Csac_0158
Transporters [BR:
csc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Csac_0158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
ABC_ATPase
nSTAND3
DUF87
AAA_24
AAA_29
AAA_18
HUTI_composite_bact
AAA
DUF5906
AAA_16
RsgA_GTPase
ATP-synt_ab
NACHT
Zeta_toxin
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABP65810
UniProt:
A4XFX5
LinkDB
All DBs
Position
166179..168383
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AA seq
734 aa
AA seq
DB search
MSKRYYCVKQHDITDCAAASLATICLQYGKEVSIARIREMAGTDRFGTTAYGVVKAAEKL
GFEAKAVRAETKEAIFEKIPLPCIAHVLIDGKLFHYVVIHEIRKERIVIADPARGIVKLN
PEEFFKLWTGILIFLVPNERFKKGKQEGVLKKFFKLLRPQKNLILNIFAVSVVYTLLGIA
AAFYYKFLMDDVIPNLLKNTLHVIATGAILITIFKVILGAFRVRLLIHLSQRLDIKLMLG
YYEHVIELPMSFFGSRKIGEIISRFMDASKIRDAVSGATLTLMIDSIMAVVGAIILYLQN
STLFFIALVMVLLYAAVVFGFNRALREANRQEMEDNAILTSYLVESLNGIEVVKAFNIEE
DVNFKTESKFVKLLKDVFKVANLNNLQSNISSAIAAVGVMVILWVGAHKVINGQMSIGEL
FTFNALLAYFVDPIKNLIGLQPMLQTAIVAAERLSEILELESEFQEDEDRKLSPSLKGDI
EIEGLNFRYGTRQLVLRDINLKIRRGEKIAIVGESGSGKTTLAKLLLGFYDYESGEIRIN
GYNLKDINKRHLREKIAYISQDIFLFSGTIFENLVLGNRDLKMEEVIEVSKLTTLDEFVT
KLPLRYNTMIEENGANLSGGQKQLIAITRALLKNPEIIIMDEATSNLDSVTEQAIGKVIE
KVCEGITTIIIAHRLSTILKCDRVVVMHEGRIVEVGTHEELMAKKGYYYNLWREQLMGLE
QKGLLGLVGSAAGG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagatactattgtgtaaagcaacatgatataacagattgtgcagcggcgagc
ttagcaacaatttgtttgcaatatggaaaagaagtatcgatagccagaataagagagatg
gcagggacagacaggtttggcaccacagcatatggagttgtaaaagcagcagaaaagctt
ggatttgaagcaaaagcagtcagagcagaaactaaggaggcaatatttgagaaaatacca
cttccgtgtatagcacatgtactgatagatggcaagctatttcattatgttgtaatacat
gagataagaaaagaaaggatagtaatagcagacccggccagaggaatagttaagctaaat
ccagaagagttttttaaattatggacaggcattttgatatttctcgtaccaaatgagagg
ttcaagaaaggaaaacaagagggagttttgaaaaagttttttaagttattgagaccacag
aagaacttgatattgaatatttttgcagtgtcagttgtatataccttgcttgggatagcg
gcagcattttattacaagtttttgatggatgatgtaatacctaatcttttgaagaataca
cttcacgttatagcaacaggtgcgatactgattacaatattcaaggtgatattaggagca
ttcagggtaaggcttttgatacatttaagtcaaagattggatattaaactgatgctgggg
tattatgaacatgtgatagagcttccgatgagcttttttggtagcaggaagataggagag
ataatttcgaggtttatggacgcgtcaaagataagggatgcggtatcaggtgcgacgctg
acgctaatgatagacagcataatggcagtggtaggcgcaattattttatacctgcaaaat
tccacgctgttttttatagcccttgtgatggttttgctatatgcagcagtagtgtttgga
tttaacagggcattgagggaagcgaacaggcaggagatggaagacaatgcaattttaaca
tcgtatttagtagagtcactgaatggaatagaggtagtaaaggcatttaatatagaagag
gatgtaaattttaagacagagagcaagtttgtaaagcttttgaaagatgtttttaaggta
gcgaatttaaacaatttgcaaagtaatataagcagcgcaatagcagcggtaggagttatg
gtaatactatgggtaggtgcacacaaggtaataaatgggcagatgagcataggagagttg
tttacgttcaatgcactgcttgcatactttgtagacccgataaaaaatctgataggattg
cagccgatgttgcagacggcgatagttgcagccgaaaggcttagtgagattttggaactc
gagagtgagtttcaagaagacgaagacaggaaattatcacccagtttgaagggtgatata
gagatagagggtttgaactttagatacggtacaagacagcttgtgctgagggatataaat
cttaagataagaagaggagagaagatagcgatagtaggtgagagtggttcaggtaagacc
acattggcaaaattgcttttaggattttatgattatgaaagcggagagataagaataaat
ggctataacttaaaggatataaacaagaggcatttgagggagaagatagcatatatatca
caagacattttcttgttcagtgggacgatatttgagaatctggtgcttggaaacagggat
ttaaaaatggaagaagtaattgaagtgagcaaattaacaacgctggacgagtttgtaaca
aaacttcctttgagatacaataccatgatagaagagaatggagctaatttgtcaggcggg
cagaaacagctaatagcaataaccagggcacttttaaaaaatcctgagataataataatg
gatgaagcgaccagtaaccttgactctgtaaccgagcaggcgataggaaaggtaatagag
aaggtatgtgaggggataaccactataataatagcgcacaggctatccactattttgaaa
tgcgacagggttgtggtaatgcatgaaggcaggatagtagaagtggggacgcatgaggaa
ctcatggcaaagaaaggatattattataacctgtggagagagcaactgatgggacttgag
caaaaaggacttttgggtttggttgggagtgcagctggaggatga
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