Caldicellulosiruptor saccharolyticus: Csac_1214
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Entry
Csac_1214 CDS
T00506
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
csc
Caldicellulosiruptor saccharolyticus
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csc03032
]
Csac_1214
03036 Chromosome and associated proteins [BR:
csc03036
]
Csac_1214
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_1214
DNA replication proteins [BR:
csc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Csac_1214
Chromosome and associated proteins [BR:
csc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Csac_1214
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Csac_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
NNH1
DUF4836
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
ABP66817
UniProt:
A4XIT2
LinkDB
All DBs
Position
1381711..1381986
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AA seq
91 aa
AA seq
DB search
MNKTDLISAMAEKSGLTKKDAEKALNAFVDAVTEALSKGEKVQLVGFGSFEVRERAERVG
RNPQTQEEIKIPATKVPVFKAGKMLKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttaatatcggcaatggcagagaagagtgggcttaccaaaaaggac
gcagaaaaggcactcaatgcgtttgtagatgctgttacagaggcactctctaagggggaa
aaggttcagcttgtcggatttggttcatttgaagtaagagaaagggcagagagagttgga
agaaacccacagacacaggaagagattaagattccagcaactaaggttcctgtattcaaa
gcaggcaagatgttaaaagacgctgttgcaaagtaa
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