Caldicellulosiruptor saccharolyticus: Csac_1292
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Entry
Csac_1292 CDS
T00506
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csac_1292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csc03019
]
Csac_1292
03110 Chaperones and folding catalysts [BR:
csc03110
]
Csac_1292
03029 Mitochondrial biogenesis [BR:
csc03029
]
Csac_1292
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csc04147
]
Csac_1292
Enzymes [BR:
csc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Csac_1292
Messenger RNA biogenesis [BR:
csc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Csac_1292
Chaperones and folding catalysts [BR:
csc03110
]
Heat shock proteins
HSP60 / Chaperonin
Csac_1292
Mitochondrial biogenesis [BR:
csc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Csac_1292
Exosome [BR:
csc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Csac_1292
Exosomal proteins of other body fluids (saliva and urine)
Csac_1292
Exosomal proteins of breast cancer cells
Csac_1292
Exosomal proteins of colorectal cancer cells
Csac_1292
Exosomal proteins of bladder cancer cells
Csac_1292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4928
EAD9
Motif
Other DBs
NCBI-ProteinID:
ABP66894
UniProt:
A4XJ09
LinkDB
All DBs
Position
1453616..1455235
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKMILFDEEARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEI
ELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRRGI
QKAVDVVVDEIKKMSKKVRGKEDITYVASISAGDEEIGKLVADAMEKVTNDGVITVEESK
TTETTLEIVEGMQFDRGYISAYMVTDTERMEAVLDDPYILITDKKISTIQDILPLLEQIV
QQGKKLLIIAEDVEGEALATLVVNKLRGTLQCVAVKAPGFGDRRKAMLQDIAILTGGQVI
SEELGLDLREVKISQLGRARQVKVQKENTIIVDGAGDPSEIKARIQSIKKQIEETTSDFD
REKLQERLAKLAGGVAVIHVGAATETEMKEKKLRIEDALAATKAAVEEGIVPGGGTAFIN
AIPALDKLIETLTGDEKTGAMIVKKALEEPLRQIAENAGLDGSVIVNKVKESPAGIGFDA
LNERFVDMFEAGIVDPTKVTRTAIQNAASAAAMLLTTEAVVAEKPEKEKNPPAPAPDMY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaatgatattgttcgatgaggaagcaagaagggcgcttgagcgtggtgta
aataaattagcagacactgttaaagtgacattaggaccaaagggaagaaacgtggttctt
gagaagaaattcggctctcctcagattgtaaatgatggtgttacaattgcgaaggagatt
gagcttgaggacccattcgaaaacatgggtgcgcagattgtaagagaggttgcgtcaaag
acaaatgacattgctggtgatggtacaacaactgcaacagtgttggctcaagcaatgatc
agagagggtttgaaaaacattgcagctggcgcaaatccaatgattctcagaagaggtatt
caaaaagctgttgatgtggtagttgatgaaatcaagaagatgagcaaaaaagtaagaggt
aaagaagacataacatatgttgcctcaatttctgcaggcgatgaggaaattggtaaactt
gttgcagatgcaatggaaaaggtaacaaacgatggtgttatcacagttgaagagtccaag
acaacagagacaacacttgagatagttgaaggtatgcaatttgacaggggttatatctct
gcttacatggtaacagatacagagaggatggaagcagtacttgacgacccatacatcttg
attacagacaagaagatttcaacaattcaagacatcttgccacttcttgaacaaatagtt
cagcaaggcaagaagcttttgataattgcagaagatgttgaaggtgaagcattggcaaca
cttgttgtaaataagctcagaggaacactccagtgtgttgcagtaaaagcacctggcttt
ggtgacagaagaaaagcaatgcttcaagacattgcaattttaacaggtggtcaggtaatt
tcagaagagcttggtcttgatttaagagaggttaagattagccagcttggtcgtgcaaga
caggtaaaagttcagaaagaaaacacaatcatagttgacggtgcaggtgatccgagcgaa
atcaaagcaagaatccagtcaattaagaagcagattgaagagacaacatccgattttgat
agagaaaaattacaagaaagacttgcaaaacttgctggtggcgttgcagtaatccatgtt
ggtgctgcaactgagacagagatgaaagagaagaaattgagaattgaagatgcattggct
gcaacaaaggctgcagttgaagaaggtattgttcctggcggtggtacagcatttatcaat
gcaattcctgcacttgacaagttaatcgaaacattgacaggtgatgaaaagacaggtgct
atgattgtcaagaaagctttagaagaaccactaagacagattgcagaaaatgcaggtttg
gatggttcagtaattgtaaacaaagtaaaagagagcccagctggtattggttttgacgca
ctcaatgaaagatttgtcgacatgttcgaagcaggtattgtagacccaacaaaggttaca
agaacagctattcaaaatgcagcttcagctgctgcaatgcttctgacaacagaggctgtt
gttgctgaaaaaccagaaaaggagaagaatccaccagcaccagcacctgatatgtactaa
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