Caldicellulosiruptor saccharolyticus: Csac_1705
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Entry
Csac_1705 CDS
T00506
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csc03016
]
Csac_1705
Enzymes [BR:
csc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Csac_1705
Transfer RNA biogenesis [BR:
csc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Csac_1705
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Dynein_heavy
Acb1
Alpha-E
YfcL
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ABP67292
UniProt:
A4XK57
LinkDB
All DBs
Position
complement(1854844..1855395)
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AA seq
183 aa
AA seq
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MRTFIGIDFPKSLKVQIVEVQSFLKSISKKGRWKYIDNFHLTLKFLGEIEYEKVEKIKQA
LEKNLKDFSRFSLKIYSCGYFKGHGNLRVVYLKPDGNLEKLNNLFSLVEDAMAEVGFQRE
KREYTPHITIAQDVVLNEPFENFQKYVENFSFDEIPVEKVILFLSEEIDRKRVYTPIFHI
ELV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacattcattggtattgactttccaaaaagcttaaaagtgcagattgttgaagta
caaagttttttaaagtcaatcagcaaaaaaggtagatggaagtacattgataactttcat
ttaacactcaaattcttaggtgagattgaatacgaaaaggtagaaaaaatcaaacaggcg
cttgaaaaaaatttaaaagatttttctcgtttttcattgaaaatttattcgtgcggatat
tttaaagggcatgggaacttgagagttgtatatctaaaaccagatggcaatcttgaaaaa
cttaataaccttttttctcttgttgaggacgcaatggcagaggttggctttcaaagagaa
aaaagagaatacacaccacacataacaattgcccaggatgttgtgttaaatgaacctttt
gagaattttcaaaagtatgttgaaaacttttcttttgatgaaattcctgtggaaaaagtc
attctttttttaagcgaagagatagataggaaaagagtctatacacctatatttcatatt
gagcttgtgtaa
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