Caldicellulosiruptor saccharolyticus: Csac_1827
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Entry
Csac_1827 CDS
T00506
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03030
DNA replication
csc03430
Mismatch repair
csc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Csac_1827
03430 Mismatch repair
Csac_1827
03440 Homologous recombination
Csac_1827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csc03032
]
Csac_1827
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_1827
Enzymes [BR:
csc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Csac_1827
DNA replication proteins [BR:
csc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Csac_1827
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Csac_1827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF4116
At5g48480-like_N
Motif
Other DBs
NCBI-ProteinID:
ABP67412
UniProt:
A4XKH7
LinkDB
All DBs
Position
1969993..1973418
Genome browser
AA seq
1141 aa
AA seq
DB search
MSFVHLHVHTEYSLLDGAVRIESLFERVRQLNMHSIAITDHGAMYGVVDFYKAAKENGIK
PIIGCEVYLAPRSRFDKEPNIDNDIHHLVLLAIDNEGYKNLSKIVSIGFVEGFYYKPRVD
REILSKYSKGLIALTSCLAGEIPKFILRDQKEKLMDAIGFYKDVFGCNFYFELQYHGIDE
QRFVNSELIRLSKKYQIPVVATNDVHYLKREDREIHDILLCIQTGKTIHDSNRMEFPTSE
FYLKSAQEMEEVFGYIPESLKNTLEIAEKCNVEFEFGKINLPKFQLPEGKSDAFEYLKEL
AFAGFEKRYSKENKAAYDRLLMELNVIKDMGFTEYFLIVHDFINYAKQNNIMVGPGRGSA
AGSIVAYCLGITNVDPIKYNLLFERFLNPERVSMPDIDIDFCYQRRQEVIDYVTNKYGKD
KVSQIITFGTMAARASIRDVGRVLGVPYAQVDEIAKMVPFSPGMTIDKALEVNHDLKKIY
EQNETVKRIIDTARSIEGMPRHTSVHAAGVVISSCPITDLVPLARTEDAIVTQFPMTTLE
ELGLLKMDFLGLRTLTVIQNTLELIKKHRKIEIDLDKIDYNDRSVYQFISEGNTNGVFQL
ESSGMKQFMKELKPENLEDIIAGISLFRPGPMDQIPVYIQNKNNKEKIEYLHPKLEPILN
VTYGCIVYQEQVMQIFRELAGYSLGRADLVRRAMAKKKADILMEERDRFIEGAVANGVDR
QTAEKIFEIIEDFASYAFNKSHAAAYAILAYQTAYLKKYFTIEFMTSLITSVMNSNEKVG
MYIEECRRFGISILPPDINKSSYDFTIEGNSIRFGLRAIKSLGENVISHILKEREQNGEF
KDLYDFVMRVDTNTVNKRIIENLIKSGAFDFTKINRNSLLASVEDILTIKQSQKKNANQI
TFFEISDDQTKIFSYKDLPEPTTEELLQMEKDTIGIYISGHPLEKYGDLISKYNVVSLAE
LSNMTEDDEYKYQQILVCGILKEVKIKLTKNNQTMAFAKIEDLTDTLEVLFFPSVYEKYS
HLIKENTIALIEAKATFREDEGVKIVAQKIDRLGEKVQTLSSQRNSNKAIAIKTDEDSIL
KSKKFTSFVRFFTGSSKIILYYKQKRLVSKSNMGIDINPTVIQQLKEWFGEENVWLEDLD
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgtccatcttcatgtacatacagagtatagtttgcttgacggagcggttcgt
atagagagtttatttgaaagagtaagacagctcaatatgcacagtattgcgataacagac
catggtgcaatgtatggtgttgtcgacttttacaaggcagcaaaagaaaacgggataaag
cctattattggctgtgaggtatatcttgctccacgttcacgttttgataaagaaccaaat
attgacaatgatattcaccatcttgtgcttcttgctatagacaatgaagggtataaaaac
ctttcaaaaattgtctcaattggatttgtggaaggcttttattataagccaagagttgac
agggaaatactttcaaagtattcaaaaggcttgattgcgctaacaagctgtcttgctggg
gagataccgaaatttattctcagagaccaaaaagaaaaactaatggatgcaattggtttt
tacaaggatgtctttggttgtaatttttactttgaacttcaatatcacgggattgacgag
caaaggtttgtgaatagtgaacttataagactatccaagaaatatcaaattcctgttgtt
gccacaaatgatgtgcattatctaaaaagggaagacagagagattcatgacatattactt
tgcattcaaacagggaaaacaatacatgatagtaacagaatggagtttcctacaagtgag
ttttatctcaaatctgctcaagagatggaagaagtattcggatatattcctgagtcactt
aaaaatactttggaaattgcagagaaatgtaatgttgaattcgaatttgggaagattaac
cttcctaaatttcagttgccagaaggaaaatctgatgcatttgagtatcttaaggaatta
gcatttgccgggtttgaaaaaagatattccaaagaaaacaaagctgcatatgataggctt
ttaatggaattaaatgtaatcaaagatatgggctttactgaatactttttgattgttcat
gattttatcaactatgcaaagcagaataatataatggtggggcctgggcgagggtctgct
gcaggaagcattgttgcatattgtctggggattacaaatgttgaccccatcaagtataac
ctccttttcgaaagatttttaaaccccgaaagagtatctatgcctgatattgacattgac
ttttgttatcagcgaaggcaagaggttatagactatgttactaacaagtatggaaaagac
aaagtgagccagattataacatttggtacaatggcagcaagagcctcaataagagatgtt
ggaagggtacttggtgtaccatatgcacaagttgatgaaattgcaaagatggtacctttt
tcaccaggtatgacaattgataaggcgcttgaagtaaatcatgaccttaaaaagatttat
gaacaaaatgagactgtcaaaagaataattgacactgcaagaagcattgagggaatgcca
cgccacacttctgttcatgcagcaggggttgttatatcaagttgtcctataactgattta
gtacctttggcaaggacagaagatgccatagttactcaatttccaatgaccaccttagaa
gaacttggtcttttaaagatggactttttgggtttgaggactcttactgttattcaaaat
accttagagcttataaaaaaacatcgcaagattgaaattgacttagacaagattgactat
aatgacaggagtgtctaccaattcatttctgaaggaaatacaaatggagtgttccagctt
gaaagtagtggtatgaaacagtttatgaaagagttaaaaccagaaaacttagaggatata
atagcaggtatatctctttttagacctggcccaatggaccaaataccagtgtatattcaa
aataaaaacaataaggaaaaaatagaatatctgcatcctaaacttgagccaattttaaac
gtcacatatggatgtattgtctaccaagagcaagttatgcaaatatttagagaactcgca
ggttattcacttggaagggcggacttggtaagacgtgcaatggcaaagaaaaaggctgac
attttaatggaggagagggacaggtttattgaaggcgctgtggcaaatggcgttgataga
cagacagctgagaagatatttgaaataatcgaagacttcgcaagctatgcattcaataaa
tctcatgcagcagcgtatgccattttagcatatcagacagcttacttaaaaaaatacttc
acaattgagttcatgacaagtttgataaccagtgtaatgaactcaaacgaaaaggttgga
atgtatattgaggagtgcagaaggtttggaatttcaattttaccacctgatataaacaag
agtagttatgatttcacaattgagggaaatagtattagatttggcttgagggcaattaag
agcttgggtgaaaatgtaatttctcatattttgaaagaacgtgagcagaatggagaattt
aaagatttgtatgattttgtaatgagagtggatactaatacagtgaataaaagaattatt
gagaacttaataaaaagtggtgctttcgattttactaaaataaatagaaattcattatta
gcctctgtagaagatattctaacaattaaacagtctcaaaagaaaaatgcaaaccaaatt
acattttttgagatttcagacgaccaaacaaagatcttttcttataaagaccttcctgaa
ccaacaactgaagaacttttgcaaatggaaaaggacacaataggaatttacataagtggt
catccacttgaaaagtatggagatttaatttcaaaatacaacgttgtaagtttagctgaa
ctttctaacatgacagaagatgatgaatataagtaccagcaaattcttgtctgtgggata
ttaaaagaagtgaaaattaagctgaccaaaaataatcaaacaatggcgtttgctaaaatt
gaggatttgacagatactttagaggttttgttctttccaagtgtttatgagaagtattcg
cacttgattaaagagaatacgattgccttgattgaagccaaagctacatttagagaggac
gagggtgttaaaattgttgcacaaaaaatagatagactaggcgaaaaagtacaaacatta
tcttctcaaaggaattccaataaagcaattgcaataaaaacagatgaagactctatttta
aaatctaaaaagtttacctcatttgtcagattctttactggcagttcaaaaatcattctt
tattacaagcaaaaaagacttgtttcaaaatcaaacatgggcatagatataaatcctact
gtaatacagcagctcaaagagtggttcggtgaagaaaatgtgtggcttgaagatttagat
tcttga
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