Caldicellulosiruptor saccharolyticus: Csac_1985
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Entry
Csac_1985 CDS
T00506
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Csac_1985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_1985
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Csac_1985
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Csac_1985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Microtub_bd
Flavi_DEAD
UB2H
HEXIM
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABP67570
UniProt:
A4XKY5
LinkDB
All DBs
Position
complement(2129304..2131289)
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AA seq
661 aa
AA seq
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MKKFKVVSDFKPTGDQPKAIEMLTEGILKGEKFQTLLGVTGSGKTFTMAKVIENVQRPTL
VLAHNKTLAAQLCSEFREFFPENAVEFFVSYYDYYQPEAYIPETDTYIEKDSSINDEIDK
LRHSATSALFERRDVIIVASVSCIYSLGSPEDYLNLTLSLRPGMIKDRDEVIRELIRMQY
ERNDIDFRRGRFRVRGDVLEIFPASNTDRAIRVEFFGDEIERITEFDVLTGEVIGRRNHV
AIFPASHYVTTSEKLKRAIKSIEEELEQRLQELRSMGKLVEAQRLEQRTRYDIEMLQEMG
FCKGIENYSRHLTGRPPGSPPYTLLDYFPKDFIMFIDESHVTIPQVRAMYNGDKARKDAL
VEYGFRLPSAYDNRPLTFEEFEEKLNQVIFVSATPGPYELKKSSRVVEQIIRPTGLVDPE
IEVHPVKGQIDHLIGEIRKRVEKNQRVLITTLTKKMAESLTEYLKDVGIRVRYMHSDIDT
IERMQIIRDLRLGKFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVIMYADRITKAMQKAIDETNRRRKIQIEYNQKHGIVPQTVRKGIRQIIEATIS
VAEEEEKYESIEKDIVQNMSKQEIEEYIKELEQQMKRFAIELEFEKAAKIRDKIFELKKL
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttaaggttgtttcagactttaagccaacaggtgaccaaccaaaggctatc
gaaatgcttaccgaaggaattttaaaaggtgaaaagtttcagacactgcttggtgttact
ggttcaggaaagacatttacaatggccaaagtaatagaaaatgttcaaagacccacatta
gttttagctcataacaaaacactggctgctcagctttgcagtgagtttagggagttcttt
cctgaaaacgctgtagagttttttgtaagctattacgattattaccagccagaagcttat
atacctgagacagatacgtatattgaaaaagattcgtccatcaatgatgaaatagataaa
cttcgacactctgcaacatctgccttgtttgagagaagagacgtaataattgtagcaagt
gtctcatgtatttacagcttaggtagtccagaagactatttaaatttaacgttatcatta
agacccgggatgataaaagatagagatgaagtaataagagaactcattagaatgcagtat
gaaagaaatgacattgatttcagaagaggcaggttcagggtacgaggtgatgtgcttgag
atatttcctgcatcaaatactgacagagcaattagggtagagttttttggagatgaaata
gagagaattaccgagtttgacgttttgactggtgaggtaattgggagaagaaatcatgtt
gcaatatttcctgcatcacactatgtcacaacctcagaaaagctaaaaagagcaattaag
agcattgaagaggagcttgaacaaaggcttcaagagctcaggagcatgggcaagcttgtt
gaagcgcaaaggcttgaacaaaggacgcgatatgacatagagatgctccaggaaatggga
ttttgcaaaggaatagaaaactactcaagacatctaacaggaagaccacctggaagtcct
ccttacaccttgcttgattattttccaaaagattttataatgttcattgatgagtcgcat
gtgacaattcctcaggtaagggctatgtataatggagacaaggcaaggaaagatgcgctt
gtagaatatggttttagacttccatctgcatatgacaaccgcccacttacctttgaagag
tttgaagagaagctcaaccaggttatatttgtaagcgcaacacctggtccttatgaactc
aaaaaatcctcaagagtggttgaacaaattataagacccacagggcttgttgaccctgaa
attgaagtacatcctgttaaaggtcaaattgaccatttgattggcgagataagaaaaaga
gtagagaagaaccaaagagttttgattacaacacttacaaagaagatggcagaaagcctc
actgaatatttaaaagatgttggtataagagtgagatatatgcactcggatattgataca
atagagcgcatgcagataataagggatttgagacttggcaagtttgacgttttagtagga
ataaacttgctgcgggaaggacttgatttgccggaagtatcacttgttgccattttagat
gctgacaaagaaggattcttgcgctcggaaacttctctcattcagacaattggacgtgct
gcacgaaacgttgatggtaaagtgattatgtatgctgacaggattactaaggctatgcaa
aaggctattgatgaaacaaatagacgaagaaaaattcagatagagtacaaccaaaagcac
ggaatagtgcctcaaactgttagaaaagggatacggcagattattgaagcaactatctcg
gttgctgaagaggaagaaaagtatgagagcatagaaaaggatattgtacagaacatgtcc
aaacaagaaatagaagagtatataaaagaacttgaacagcagatgaaaagatttgctata
gaacttgaatttgaaaaagcggctaagataagagataaaatatttgaactaaagaaattg
ctttaa
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