Caldicellulosiruptor saccharolyticus: Csac_2064
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Entry
Csac_2064 CDS
T00506
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Csac_2064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csc03019
]
Csac_2064
03016 Transfer RNA biogenesis [BR:
csc03016
]
Csac_2064
Enzymes [BR:
csc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Csac_2064
Messenger RNA biogenesis [BR:
csc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Csac_2064
Transfer RNA biogenesis [BR:
csc03016
]
Prokaryotic type
tRNA degradation factors
Csac_2064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
T6PP_C
SPATA25
RIP_P131-like
Motif
Other DBs
NCBI-ProteinID:
ABP67649
UniProt:
A4XL64
LinkDB
All DBs
Position
complement(2213226..2215331)
Genome browser
AA seq
701 aa
AA seq
DB search
MESKIYKMELAGRELSFEIGKYALLANGAVLARYGDTAVLVTACASEKPREGINFFPLTV
DYEERLYSVGKIPGGFIKREGKPSEKAILSARLIDRPIRPLFPKDFYHDVSVIATVLSVD
PDNPPDVLAMLGSSVALSISDIPFEGPTGSVLVGYVDGKIVINPTAKEREVSKLHLVVSG
TKDKVMMIEAGAQEIPEDIMLEAIMTAQEEIKKIVEFIEGIVKEVGKPKMQYEKRVVPEE
IKQKVRELAYEKAYQYVQIPDKIERDKKLDELKEEVLKAFEGETEDTLLLVDDALYNLEK
EIVRKMIAEEGKRPDGRKFDEIRPLYAEVGILPRTHGSALFKRGYTQVLTVATLGTKGEM
QFLDGLEEEEAKRYMHHYNFPPYSTGESKPVRGPGRREIGHGALAERALEPVIPSEDEFP
YTIRLVSEVLTSNGSTSQASVCGSTLALMDAGVPIKAPVAGISIGLITKEDGSFITLTDI
QGIEDFFGDMDFKVAGTREGITAIQLDIKIHGLTKEIIEKALYQAREARLKILDFMQTVI
DKPRSELSPYAPKIFKTTVDPEKIRDIIGPGGKMINKIIAKTNVKIDIEPDGRIFVAAPD
DISGNRAISMIEGIGREIEVGQFFLGKVTRTASYGAFVEIYPGKEGLVHISQLDNKKLKS
VDEVVKVGDLVLVKVIGIDRLGRIALSRKEALNVTYSRKAK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttggagagtaaaatttataaaatggagcttgcaggaagagaactgagttttgagattggt
aaatatgcacttttggcaaatggagcagtgcttgcaagatacggtgacacagctgtttta
gtaactgcttgtgcttcagaaaaaccaagagagggtataaattttttcccattgacagtt
gactatgaagagagattatattctgtgggaaagattccaggtgggtttatcaaaagagag
ggaaaaccttctgaaaaggcaattctgtctgcaagattaattgataggccaatacgtcct
cttttcccgaaagacttttatcatgatgtatctgtcatcgcaacagttttgtcagttgat
cctgacaatccacctgatgttttggcaatgcttggctcgtcagttgctctatcaatatct
gatattccatttgaaggtccaacaggctctgtgttggttggatatgtggacggaaagatt
gtaatcaatcctacagcaaaggaaagggaagttagcaaactgcatcttgttgtttctggc
acaaaagataaagtgatgatgattgaggcaggtgctcaggagattccagaagacataatg
cttgaggctataatgacagctcaagaggagattaaaaagattgttgagtttatagaggga
atagtaaaagaagttggaaagccaaagatgcaatatgaaaaaagagtagtgcctgaggag
ataaagcaaaaggtaagagaacttgcatatgaaaaagcatatcagtatgttcagatacca
gataagatagaaagagataaaaaacttgatgaactgaaagaagaggttttaaaggcattt
gaaggagaaacagaagatacactccttttggttgacgatgcgctttacaaccttgaaaaa
gagattgttcgaaagatgattgctgaagagggtaaaagaccagatggacgcaaatttgat
gaaatcaggcctctgtacgctgaggtaggcattttaccaagaactcacggctcagccttg
ttcaaaagaggatatactcaggttttgacagttgcaacacttggaacaaaaggtgagatg
cagtttttagatggacttgaagaagaagaggcaaaaaggtatatgcatcactataacttc
ccaccatattcaacaggtgagtcaaaacctgtaagaggacctggcagaagagagatagga
catggtgctttagcagagagggcgcttgagcctgttataccttcagaagatgagttcccg
tacacaataagacttgtatcagaagttttaacatcaaacggttcgacctcacaagcaagt
gtatgcggaagcactcttgcactaatggatgctggggttcctataaaagcacctgttgca
ggaatatcaattggtcttatcacaaaagaagatggcagctttatcacacttactgatatt
cagggaatagaagatttctttggtgatatggattttaaagtggctggaactcgtgaaggc
atcactgcaatccaacttgatataaaaatccatggtttgacaaaagagataattgaaaaa
gcgttatatcaggcaagagaagcaagactgaagattttagactttatgcaaacagttatc
gacaagccgcgaagtgagctttcaccatatgctcctaagatatttaaaactacagttgac
ccagaaaaaattcgtgatataattggtcctggtggtaagatgattaataaaatcattgca
aaaacaaatgtgaaaattgatatagaaccagatggtaggatatttgttgcagctcctgat
gatatctcaggtaacagagcgattagtatgattgaaggtataggtcgtgaaattgaagtt
ggccagtttttcttgggtaaagttacaagaacagcttcgtatggggcgtttgttgagata
tatcctggtaaagaagggcttgttcatatttctcagcttgacaacaagaaactaaaatcg
gttgatgaggttgttaaagtaggagaccttgtattagtaaaggttattgggattgacaga
cttggccgaattgcgctttctcgaaaggaagctttaaatgtcacatattcgcgaaaggca
aaataa
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