Caldicellulosiruptor saccharolyticus: Csac_2239
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Entry
Csac_2239 CDS
T00506
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Csac_2239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_2239
Enzymes [BR:
csc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Csac_2239
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Csac_2239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
ABP67817
UniProt:
A4XLN2
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All DBs
Position
complement(2369387..2370247)
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AA seq
286 aa
AA seq
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MTRFGPAGNSQSFYDAGHKSSVEVPRWLYSIGLSAYEYQCNKGVNISKEKARQIGDEAKK
YDILVSIHAPYYINFGSQEEEKLQKSKEYIYECVEVAKEMRAERIVFHPGSCAKVDRKIA
FETAKKAILEVVNVVREMKVEGIFLCPETMGKKNNLGSVDEIIEICKIDEFLLPTIDFGH
INAFTGGGLKTKEDFVNLLKKFIEQLGYERMRRFHSHFSRIEYTSQGEKKHWNYEDKQYE
PDFEPLAEALVELKLEPVIICESKDYMSEDALVLKKIYYEILEKRM
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggtttggaccagcaggtaactctcagagcttttacgatgcagggcataaatcg
agtgttgaagtaccaagatggctttattctattgggctttcggcatatgaataccagtgc
aacaaaggcgtaaacatttcaaaggaaaaggcaagacagataggagatgaagctaaaaag
tatgatatacttgtgtcaatccatgctccgtattatataaactttggcagtcaagaggaa
gagaaattgcaaaaatctaaagaatatatttatgagtgcgtagaggtcgcaaaagaaatg
agagcagagaggattgtattccatcctgggtcttgtgcaaaggttgacagaaaaattgcc
tttgagactgccaaaaaagctatacttgaagttgtaaatgtggtgagggaaatgaaagta
gaaggaatttttttatgtccagagacaatgggaaagaaaaataatcttggaagtgttgat
gaaataatagagatatgcaaaatagacgaatttcttcttccaacaattgattttggacac
attaatgcattcactggtggagggttaaaaaccaaagaggattttgtgaatcttttaaaa
aaattcatagaacagcttggatacgagagaatgagaagatttcacagtcactttagcaga
attgaatacacatcacaaggagaaaagaagcactggaattatgaggacaagcaatatgaa
cctgactttgagccgttggcagaggctcttgttgaactaaagcttgaacctgtcatcatc
tgtgagtcaaaagattacatgagtgaagatgcccttgtgctaaagaaaatttactatgaa
atattagaaaaaaggatgtga
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