Caldicellulosiruptor saccharolyticus: Csac_2259
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Entry
Csac_2259 CDS
T00506
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Csac_2259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csc03021
]
Csac_2259
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_2259
Enzymes [BR:
csc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Csac_2259
Transcription machinery [BR:
csc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Csac_2259
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Csac_2259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
PASTA
TfoX_C
Motif
Other DBs
NCBI-ProteinID:
ABP67837
UniProt:
A4XLQ2
LinkDB
All DBs
Position
complement(2390735..2391709)
Genome browser
AA seq
324 aa
AA seq
DB search
MIEIQKPTIRCEELSQDQKYGRYVIEPLERGYGITIGNALRRTLLSSLPGAAVTAVKIDG
VLHEFSTIPGVLEDVPEIILNLKGLAIKMSSPGPKVMYIEAQGECEVKAKDIKADADIEI
CNPEHHIATLNEDARLFMEITVNQGKGYVPAERNKQSNQPIGVIPVDSIYTPVTKVNYKV
ENTRVGQVTDYDKLTMEIWTNGTIRPDEALTVAAKILIEHFNLFTDLSNIPTKIETVVKQ
EPPKRNKLLDMTIEELELSVRSYNCLKRAGINTVEDLVNKTEEEMMKVRNLGKKSLEEVI
QKLHSLGLSLKKSDSTPKGEEEEK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaaattcaaaaaccaacaattagatgtgaagagttaagccaagaccaaaagtat
ggtcgatatgtcattgaacccttggaaaggggttatggaatcacaattggtaatgcactt
agaagaacgcttttatcgtctttgcctggtgcagctgtgacagcggtaaaaatagatggt
gttctccatgagttttctactattccaggagtattagaagatgttccagaaattattctt
aacctaaaggggttagcaatcaagatgtcatcacccggtccaaaggtaatgtatatagag
gcacagggtgagtgtgaggtaaaggcaaaggatataaaagcagatgctgatatagagatt
tgcaatcctgaacatcatattgcaacgctgaatgaagacgcacgactttttatggaaata
acagtgaatcagggcaaaggctacgttcctgcagagagaaacaaacaatcaaaccagcca
ataggtgtaattcctgttgattcaatctacacccctgttactaaggtaaattataaggtt
gagaatacaagagttggtcaggttacagattatgacaagcttacaatggagatttggaca
aatggtactatcaggcctgatgaggcactaacagttgctgcaaagattttgattgagcat
tttaacctgtttactgatctttcaaatattccgacaaagatcgagacagttgtaaagcaa
gaaccaccaaaaaggaataaacttcttgatatgaccatagaagaacttgagctttcagtc
aggtcgtataactgtctcaagagagctggtattaacactgttgaagatttagtcaacaag
acagaagaagagatgatgaaagtaagaaaccttggtaaaaagtcattagaagaggtcatt
caaaagcttcacagcttaggactgagcctcaaaaagagcgatagcacgccgaagggggag
gaagaagagaaatga
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