Caldicellulosiruptor saccharolyticus: Csac_2349
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Entry
Csac_2349 CDS
T00506
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
csc
Caldicellulosiruptor saccharolyticus
Pathway
csc03030
DNA replication
csc03430
Mismatch repair
csc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Csac_2349
03430 Mismatch repair
Csac_2349
03440 Homologous recombination
Csac_2349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csc03032
]
Csac_2349
03400 DNA repair and recombination proteins [BR:
csc03400
]
Csac_2349
Enzymes [BR:
csc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Csac_2349
DNA replication proteins [BR:
csc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Csac_2349
DNA repair and recombination proteins [BR:
csc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Csac_2349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
Rv2179c-like
DNA_pol3_a_NII
HHH_3
DEDDh_C
RNase_H_2
DUF655
DNA_pol_A_exo1
tRNA_anti-codon
GPI
ACOX
T2SSK
DUF6282
DUF7243
ZapA
Motif
Other DBs
NCBI-ProteinID:
ABP67927
UniProt:
A4XLZ2
LinkDB
All DBs
Position
complement(2462465..2466673)
Genome browser
AA seq
1402 aa
AA seq
DB search
MSEVAYLPLKPVKVEFDKANKFLKIYIDDIKGLDEINLIELESRFKNSLDICEDVEVKLL
NNKVVNIKELLQKHKWFLVYKISKKCNGLKAFLKECEITLEGDKLVFLVPNGIRDIMLER
KLDMLVKDILSEEFGCKCDVEFRIKDFYIHFDFDSEIESYLKESEEKRKEKEAKEANKKD
IQQDPDVIFGKRINEKEEITPISLIKVGSKCIIEGEVFNIEIKETKNQNILIYKLYVTDY
NTSTYVKIVAKKDNTPTSISVGDYIKVEGNVEFDEFEKAIVVNAKNVNRAVKPERLDTAD
VKRVELHAHTKMSTMDAVCSAEELIKTAAKWGHRAIAITDHGVVQAFPEAQEVSKSEGLK
VIYGMECYLIDDGVPVVYNPKENQSLDTTFVVVDIETTGFDNQKDRIIEIGAVKIENGEI
VDRFSTFVDPEGKIPIRISELTGIYQNMVDNAPKLSDAILEFEKFCSGAILVAHNAQFDI
GFLKRSYQECGLIFDYTYIDTLELSRRVLTDLSSHKLNKVAEFLNIELKHHHRADSDAET
TAKIFISLIEKLKSRGYKYLKELNTIETNTKADLKSHSYHATILVKNQQGLKNLYKLVSY
SHLEYFYKRPRIPKSVLIQLKDGLILGSACESGEVFRAIMEGKSDDELEKIVSLYDFLEI
MPVENNSFLIREGYLKDEEQLRQINKKIYQLGKKLNKLVVATSDAHYCHPHQRILRQILK
HNQGYDDVENDPYLYFRTTDEMLKEFEYLGKEAAYEVVVENTNKIADMIEDVKPIPDETF
PPKIEGAEEEIYNMTMKRAHEIYGEPLPEIVKQRLEKELNSIIKNGFAVMYLIAQKLVSK
SLSDGYLVGSRGSVGSSLVATMCGITEVNPLPPHYVCPNCKYSEFVTDGTVGCGYDLEDK
DCPRCGTKLKKDGHDIPFETFLGFDGDKEPDIDLNFSGEYQPIAHKFTEDLFGQGYVFRA
GTISTVAEKTAHGFVTKYAEEKGLSLHPAEVLRLSQGCTGVKRTTGQHPGGLMIVPKDKE
IFDFTPIQHPADSEDKSVITTHFDYHAISGRLLKLDILGHDDPTVIRMLQDLTGVDPRSI
PLDDKATLSIFTSTEALGVSPEDIDCEVGTFGIPEFGTRFVRQMLIETKPKSFAELVRIS
GLSHGTNVWTNNAQDLVRNGIATLKEVISTRDDIMLYLIQKGVPPKDSFRIMEDVRKGKG
LKPEDEELLRSYGVPEWYIESCKKITYMFPKAHAAAYVMMAFRIAYFKVHYKEAFYATYF
TVRADDFDYATILKGREFIRQKIRDMENRMNSLSQKDKNLLTVLEIANEMLARGLKFYPV
DLNESDAEKFIIKDGGLLIPFNALPNVGIAAARNIVEARKEGKFLSIEDLQRRAKLNKQV
IEILTQYKVLKDLPQTSQLSFF
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtggcttatttaccactcaaacctgtcaaggttgaatttgacaaagcgaat
aagtttctgaaaatatacattgatgatattaaggggttagatgaaataaatttaattgaa
cttgaaagtagattcaaaaattccttggatatttgcgaagatgtagaggttaaacttttg
aataacaaggttgtgaatataaaagaacttttacagaaacacaaatggtttttggtctat
aagatatcaaaaaagtgcaatgggctcaaggcatttttaaaagagtgcgagattacttta
gaaggtgataagcttgtatttttagtgccaaatggaattagagatataatgcttgaaaga
aagttagatatgcttgtcaaggatattttaagtgaagagtttggctgcaagtgtgatgtt
gagtttaggattaaagacttttatattcactttgactttgatagtgaaattgaaagctat
ttgaaagagtctgaagagaagagaaaggaaaaggaagcgaaagaagccaataaaaaagat
attcagcaagatccagatgtcatatttggcaaaagaattaacgaaaaagaagaaataact
cctatttctttaataaaggtaggcagcaagtgtataattgagggtgaagttttcaatatt
gagataaaagagacaaaaaaccagaatatactcatttacaaactgtatgtaacagactac
aacacatctacttatgtcaaaattgttgcaaaaaaagacaataccccaacttcaatttct
gtgggagattatataaaagttgaaggaaacgttgagtttgatgagttcgaaaaggcaatt
gttgtaaatgcaaagaatgtaaacagagctgtgaaacctgaaaggcttgacacagctgat
gtgaaaagggtagaacttcatgcccatacaaagatgtctacaatggatgctgtgtgttca
gcagaagaacttataaagactgctgcaaagtgggggcacagggcaattgcaattactgac
catggtgttgtacaagcattcccagaagcccaggaagtgagtaaaagcgaaggtcttaag
gtcatatatggaatggaatgctatttaattgacgacggtgtacctgttgtatataatccg
aaagaaaaccagagcttagacactacttttgtagttgttgatattgagacaacaggtttt
gacaaccaaaaagacaggataattgagattggagctgttaagatagaaaacggcgagatt
gttgatagattttcaacatttgtggacccggaaggaaagattcctattagaatatctgaa
ctaacaggtatttaccagaatatggtagataatgctccaaagctttcagacgctatactg
gagtttgagaagttctgcagtggggccattttggttgcgcataatgcacagtttgatatt
ggatttttgaaaaggtcttatcaagagtgcggccttatctttgactatacatatatagat
acattagagctttcaagaagagtgcttacagatttgtcctcccataagttaaacaaagtg
gcagaatttctaaatattgaacttaaacatcatcacagagcagactctgatgctgaaact
actgcaaagatttttataagtctgattgaaaagctaaaaagtcgaggatataaatattta
aaggaacttaatactattgaaacaaatacaaaagcagatttgaaatcgcatagctaccat
gccacaatacttgtaaaaaatcagcaggggctaaagaacctttataagcttgtttcatat
tctcatcttgagtatttttataaacgaccaagaattcctaaaagtgttttaatacagctg
aaagatggactcattttgggaagtgcatgcgagtcaggagaggttttcagggcgattatg
gaaggaaaaagcgatgatgagcttgagaagatagtatcactttacgattttcttgaaatt
atgcctgttgagaataactcttttttaattagagaaggatatttaaaagatgaagagcag
ctcagacaaatcaacaaaaagatatatcagcttgggaaaaaactaaataaattggttgtt
gcaacatctgatgcgcattattgccatcctcatcagagaatcttgcggcaaattctaaag
cacaaccaaggttacgatgacgtagaaaatgatccatatttatactttagaacaactgat
gagatgttaaaagagtttgaataccttggcaaagaagcagcatatgaggttgttgttgag
aacaccaacaaaattgctgatatgatagaggatgtaaaaccaatacctgatgagacattc
ccgccaaagattgaaggcgctgaagaagagatttacaacatgacaatgaaaagagctcat
gaaatatatggagaaccgcttccggagattgttaagcagagacttgaaaaagaactaaat
tctattataaaaaatgggtttgctgtaatgtatttgattgcacaaaagcttgtgtcaaag
tcgttgtcagatggatacttggttggttcacgtggttctgttggttcatcacttgttgct
acaatgtgtggaattacagaggtaaatccactgccaccgcactatgtttgtcctaactgt
aagtattctgagtttgtgacagatggaacagttggctgtggttatgaccttgaggacaaa
gactgtccaaggtgtggcacaaaacttaaaaaagatggtcatgatataccgtttgaaact
tttttgggctttgatggtgacaaagaacctgatatagatttgaacttctcaggtgaatat
cagcccattgctcataagttcacggaagatctttttggtcagggttatgttttcagagca
ggtacaatctcaactgttgctgaaaagactgcacatgggtttgttacaaagtatgcagag
gaaaaaggactgagcttgcacccggcagaggttttaagactttcgcagggctgcacaggt
gttaaacgtacaacaggccagcacccaggtgggcttatgattgttccaaaagacaaagag
attttcgactttacgccaattcagcatcctgcagatagcgaggacaaaagtgtaattaca
acccactttgactatcatgcaatctctggaagattattaaaacttgatatacttggacat
gacgacccaactgtaataagaatgcttcaggacttaacaggagttgacccgcgatcaatc
ccacttgatgacaaggctactttgtcaatctttacaagtacagaagcacttggagtttct
ccagaggatattgactgtgaggttggaacttttggcataccagaatttggtacaagattt
gtaagacagatgctgatagagacaaaaccaaagtcgtttgctgagcttgttagaatatca
gggctttcccatggaacaaatgtgtggacaaataacgcacaggaccttgtcagaaacggc
attgcaacgttaaaagaggtaatctcaactcgtgacgatataatgctataccttattcaa
aaaggtgttccgccgaaagacagttttagaataatggaggatgttcgaaaagggaagggt
ttaaaaccagaagacgaagagcttttgagaagctacggtgtgccagagtggtatatagaa
agctgtaagaaaatcacatacatgtttccaaaggctcacgctgctgcttatgtcatgatg
gcatttaggattgcctactttaaggttcattataaagaagctttctatgccacatacttc
acagtcagagcagatgactttgattatgcaaccatattaaagggaagagagttcataaga
caaaagataagagacatggagaatagaatgaattccctatctcaaaaggacaaaaacctt
ctgacagtgcttgagatagcaaatgagatgttagcaagaggtcttaagttttatcctgtt
gatttgaacgaatcagatgcagaaaagtttataataaaagatgggggacttttgattcca
tttaatgccttgccgaacgttggaattgctgctgcacgaaatattgttgaggcaagaaag
gaaggaaaatttttgtccattgaggaccttcagagaagagcaaaactaaataaacaggta
attgagatattgacacaatacaaggttttaaaggatttacctcagacaagccagctaagt
ttcttctaa
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