KEGG   Clostridium scindens: HDCHBGLK_00058
Entry
HDCHBGLK_00058    CDS       T06591                                 
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
csci  Clostridium scindens
Brite
KEGG Orthology (KO) [BR:csci00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csci03400]
    HDCHBGLK_00058 (sbcD)
DNA repair and recombination proteins [BR:csci03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HDCHBGLK_00058 (sbcD)
    Archaeal homologous recombinant proteins
     HDCHBGLK_00058 (sbcD)
SSDB
Motif
Pfam: SbcD_C Metallophos Metallophos_2 DNA_pol_E_B
Other DBs
NCBI-ProteinID: QBF72713
UniProt: B0NJH5
LinkDB
Position
complement(65594..66754)
AA seq 386 aa
MRFFHLSDLHIGKQLHRYNLREDQEAILEEVVAYAKDLRPDAIIIAGDIYDKSVPSAEAV
AVFDEFLTSLSEITPAIPLLIISGNHDSAQRLDYASDILKNHQIYLAGTAPRTEGEHIRK
VTLNDEYGEVDFYLLPFLKPSYVRNVFPEEPPQTYGDAVAELIRREEIDYCGRRNVLISH
QFYTGNELPKTCDSETFSVGGIDNVDIGAVKAFDYVALGHLHGAQCVGMPHICYCGTLLK
YSVSESGQEKALTLVTLSQKGAPPKAERLALHPLRDVKKKRGNLAEILEGANEKERDDYV
SITLTDEVDPYKPKEQLEEVFDRILEVKADNTRTRNKLREMDEELVLKDPLETFCDFYQE
MQGRQLAQEELEIMKKMFDEAEGEER
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgagattttttcatctttcagacttgcatatcggcaagcagctgcaccgttataattta
agagaggatcaggaggccatactggaggaagtggtggcgtatgcgaaagacctccgtccg
gatgccatcatcattgcaggagacatctatgacaaatctgtgccttcagcggaagcggtc
gccgtcttcgacgaatttctgacctctctttctgagattaccccggctattccgttactc
atcatcagtggaaaccatgattcggcccagaggcttgattatgcttccgacattctgaaa
aaccaccagatctatcttgcggggacggctccaaggacagagggagagcacatacgcaag
gtgacgctaaacgatgaatatggcgaggtggatttttatctgctgccgtttttgaagcct
tcctatgtaagaaacgtatttccggaagaaccgcctcagacttatggggatgctgtcgca
gaactgatcaggcgagaagagattgactactgcggcaggcgcaacgtgctgatctcccat
caattctatacgggaaatgaactgccgaagacttgcgattcggagacattttctgtagga
ggaatcgataatgtggatattggggcggtaaaggcgtttgactatgtggctctggggcat
ctgcacggcgcccagtgcgtgggcatgcctcatatctgctactgcggcacgctgctgaaa
tattcggtcagcgagtctggccaggaaaaggcgcttacgctggtaaccctttcccagaag
ggcgcgcctcccaaagcagagcggcttgcgcttcatcctctccgggatgtcaaaaagaag
agggggaatctagcggagattcttgagggagcgaatgaaaaggagcgggatgattatgtc
agcattacgctgactgacgaggtggatccctataagcccaaagaacagctggaagaagta
tttgaccggatcctggaggtaaaggcagacaataccagaaccagaaataagctgcgggag
atggacgaggaactggtgcttaaagaccccctggagacattctgtgatttctatcaggag
atgcagggcagacagcttgcacaggaagaattggaaattatgaagaagatgtttgacgag
gcggagggagaagagcgatga

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