Entry |
|
Symbol |
sbcD
|
Name |
(GenBank) Nuclease SbcCD subunit D
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
csci Clostridium scindens
|
Brite |
KEGG Orthology (KO) [BR:csci00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:csci03400]
HDCHBGLK_00058 (sbcD)
DNA repair and recombination proteins [BR:csci03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDCHBGLK_00058 (sbcD)
Archaeal homologous recombinant proteins
HDCHBGLK_00058 (sbcD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(65594..66754)
|
AA seq |
386 aa
MRFFHLSDLHIGKQLHRYNLREDQEAILEEVVAYAKDLRPDAIIIAGDIYDKSVPSAEAV
AVFDEFLTSLSEITPAIPLLIISGNHDSAQRLDYASDILKNHQIYLAGTAPRTEGEHIRK
VTLNDEYGEVDFYLLPFLKPSYVRNVFPEEPPQTYGDAVAELIRREEIDYCGRRNVLISH
QFYTGNELPKTCDSETFSVGGIDNVDIGAVKAFDYVALGHLHGAQCVGMPHICYCGTLLK
YSVSESGQEKALTLVTLSQKGAPPKAERLALHPLRDVKKKRGNLAEILEGANEKERDDYV
SITLTDEVDPYKPKEQLEEVFDRILEVKADNTRTRNKLREMDEELVLKDPLETFCDFYQE
MQGRQLAQEELEIMKKMFDEAEGEER |
NT seq |
1161 nt +upstreamnt +downstreamnt
atgagattttttcatctttcagacttgcatatcggcaagcagctgcaccgttataattta
agagaggatcaggaggccatactggaggaagtggtggcgtatgcgaaagacctccgtccg
gatgccatcatcattgcaggagacatctatgacaaatctgtgccttcagcggaagcggtc
gccgtcttcgacgaatttctgacctctctttctgagattaccccggctattccgttactc
atcatcagtggaaaccatgattcggcccagaggcttgattatgcttccgacattctgaaa
aaccaccagatctatcttgcggggacggctccaaggacagagggagagcacatacgcaag
gtgacgctaaacgatgaatatggcgaggtggatttttatctgctgccgtttttgaagcct
tcctatgtaagaaacgtatttccggaagaaccgcctcagacttatggggatgctgtcgca
gaactgatcaggcgagaagagattgactactgcggcaggcgcaacgtgctgatctcccat
caattctatacgggaaatgaactgccgaagacttgcgattcggagacattttctgtagga
ggaatcgataatgtggatattggggcggtaaaggcgtttgactatgtggctctggggcat
ctgcacggcgcccagtgcgtgggcatgcctcatatctgctactgcggcacgctgctgaaa
tattcggtcagcgagtctggccaggaaaaggcgcttacgctggtaaccctttcccagaag
ggcgcgcctcccaaagcagagcggcttgcgcttcatcctctccgggatgtcaaaaagaag
agggggaatctagcggagattcttgagggagcgaatgaaaaggagcgggatgattatgtc
agcattacgctgactgacgaggtggatccctataagcccaaagaacagctggaagaagta
tttgaccggatcctggaggtaaaggcagacaataccagaaccagaaataagctgcgggag
atggacgaggaactggtgcttaaagaccccctggagacattctgtgatttctatcaggag
atgcagggcagacagcttgcacaggaagaattggaaattatgaagaagatgtttgacgag
gcggagggagaagagcgatga |