Clostridium scindens: HDCHBGLK_00552
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Entry
HDCHBGLK_00552 CDS
T06591
Symbol
selB
Name
(GenBank) Selenocysteine-specific elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csci03012
]
HDCHBGLK_00552 (selB)
Translation factors [BR:
csci03012
]
Eukaryotic type
Elongation factors
HDCHBGLK_00552 (selB)
Prokaryotic type
HDCHBGLK_00552 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
WHD_3rd_SelB
Beta-barrel_SelB
WHD_2nd_SelB
MMR_HSR1
FeoB_N
HflX_C
MnmE_helical
SRPRB
RsgA_GTPase
MMR_HSR1_Xtn
MeaB
GTP_EFTU_D4
Lyase_1
GTP_EFTU_D3
Motif
Other DBs
NCBI-ProteinID:
QBF73188
UniProt:
B0NFK0
LinkDB
All DBs
Position
complement(522932..524845)
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AA seq
637 aa
AA seq
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MKNIIIGTAGHIDHGKTTLIKALTGRNTDRWEEEQRRGITIDLGFTYFDLPSGDRAGIID
VPGHERFINNMVAGVVGMDMVLLVIAADEGIMPQTREHMDILNLLGIEKSIIVLNKCDLV
DGEWMELVEEEVKEELEGTFLEHAPVVKVSAATGEGLEVLIDTISQMTSDEMMTKDISTI
PRLPIDRAFTLSGFGTIITGTLVSGTITKDDLLEMYPIGKECKIRSIQVHGQDRKECYAG
QRVAINLSNVKKREIKRGCVLAPPNSMKNTDLLDVRLNVLESSMRVLTNHTRLHFFTGTS
EILCRAVLLDKEEIGPGESGYVQLRLEEEIAVRRGDKFVVRFYSPMETIGGGVILEPNPG
VKKRFQENVIEELKRKESGSSADVIELHVRERADTLITTAELAKLTALSIDEVQEDISEL
LSQGLVQVFAMRKDTYVWHAESIRAAKQTLDKALREYEEKYPYRYGMKKAEVQMTYFQKI
KPNVFDKIVEMLIEEGCLKRVDEFLCTPQYQVKKDTRYDKVSGILLDTFTNAKYDFVRYS
EIDFKGTVKETADDILNILLEEQKIVKVTEDMYTLTEYMERAKELIQEHLKGEPVITIAQ
VRDMFDTSRKSAKPIIEYMDSIKVTKKTGAESERVAY
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatattattattggtacagccggccatatcgaccatggaaagacaactttaatc
aaggcgctgaccgggaggaatacggaccggtgggaagaggagcagagaaggggaattacc
attgatctgggatttacctattttgacctgccaagcggagaccgtgccggcatcatagat
gttccgggccatgaaagattcatcaataatatggtggcaggcgtggtaggtatggatatg
gttctgctggtcattgccgcggacgaaggcatcatgccacagaccagggagcatatggat
atcctgaatctgctgggaattgagaagagtatcatcgtcctgaacaaatgcgaccttgtg
gatggggaatggatggaattggtagaagaagaagtcaaggaagaattggaaggaaccttt
ctggaacatgcgccggtagtaaaagtatcggctgccaccggggaaggcctggaagtcctg
atcgataccatcagccaaatgacaagcgatgagatgatgacaaaagatattagcactata
ccaagacttccaattgaccgcgcgtttacattgtccggctttgggacgatcattacggga
actttggtgtcggggaccattaccaaggatgatctgctggaaatgtatccgattgggaag
gaatgcaagataagaagcatccaggtgcatggccaggacaggaaagagtgctatgcagga
cagcgggttgccatcaacctgtcgaatgtgaagaagcgcgagatcaagagagggtgcgtg
ctggcgcctccgaatagtatgaagaatacagatcttctggatgtcaggctcaatgtgctg
gagtcttccatgcgcgtgctgaccaatcatacccgtcttcatttctttaccggaaccagc
gagatattatgccgggcggtgcttcttgacaaggaggagatcggtccaggggagagtggc
tacgtgcagctcaggctggaagaagagattgcggtaaggcggggagacaaattcgtggtc
cgcttttattctccgatggagaccattggaggaggcgtcatcctggagccaaacccaggg
gttaagaagcgtttccaagagaatgtcatagaagaattaaagcgcaaggaatccggctcg
tctgcggatgttatcgaacttcatgtaagggagcgcgcggatacgctgatcacgacggcg
gaacttgccaagcttaccgcgctgtccattgacgaagtgcaagaagacataagcgagctc
ttaagtcaagggctggtgcaggtatttgccatgaggaaggatacctatgtatggcatgcc
gagtccataagggctgcgaagcagactcttgataaggcgctaagagaatatgaagagaaa
tatccttacaggtatggcatgaagaaggcggaagtccagatgacctatttccagaagatc
aagccgaatgtatttgacaagattgtggagatgctgatagaggagggatgcctgaagaga
gtagatgagttcttgtgtacgccgcaataccaggtaaagaaagacacgcgctatgacaag
gtgtcaggaatcctcctggacacatttaccaatgcgaaatatgattttgtccggtattcg
gagattgattttaaaggaaccgtgaaagagacggcagatgatatcctcaacatccttctg
gaggaacagaagatagtgaaggtgacggaagatatgtatactctgacggaatacatggag
cgggcaaaagaacttatacaggagcatttaaaaggggaacccgttattacgatcgcgcaa
gtacgcgatatgtttgataccagcaggaaaagcgccaagccgatcatcgaatacatggac
agcatcaaagtaactaagaaaacgggagcggaaagtgaaagggtagcatactaa
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