Clostridium scindens: HDCHBGLK_00693
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Entry
HDCHBGLK_00693 CDS
T06591
Symbol
yphF
Name
(GenBank) ABC transporter periplasmic-binding protein YphF
KO
K10439
ribose transport system substrate-binding protein
Organism
csci
Clostridium scindens
Pathway
csci02010
ABC transporters
csci02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDCHBGLK_00693 (yphF)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HDCHBGLK_00693 (yphF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csci02000
]
HDCHBGLK_00693 (yphF)
Transporters [BR:
csci02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HDCHBGLK_00693 (yphF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QBF73319
UniProt:
B0NGB0
LinkDB
All DBs
Position
complement(659212..660234)
Genome browser
AA seq
340 aa
AA seq
DB search
MKKKILSAILCVAMIATMAVGCTTKAPTSGGDDKKDTEKKDSYKVGISIQSLKNDYWAGV
MGKLEDLLKEKGWDYTLQDCTNNSATQISQVENFITSGCDLIMVHPSDADALETVCQEAL
DAGIKVMCWDDPMENTTANWILDNTALGNEIGKTAAAFINEHYTADKPAEVCVIGKPSTK
VLLERANGIKEGLEKNCDKGNYEIVAEVDGLEANEAQSNVETVLQAHPDCSVFVGVGAGA
MIGSNEALLQKFGGAGKIPENVGVITTDVTPQQLESLKAGDEAVRAIIGFEGSSLDTATA
CMKMYERILDGEDFSGDNHNVQRPTMEINLDNIDDIMKGM
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaatcttaagtgcaatcctttgcgtggcaatgattgcaacgatggctgtt
ggttgtacaaccaaggcgccaacctcaggcggagacgacaagaaggatactgagaagaaa
gacagttacaaagttggtatctctatccagtctctgaaaaacgattactgggcaggtgta
atgggcaaacttgaggatcttctgaaggaaaagggatgggactataccttacaggattgt
acgaacaactccgcaacacagattagccaggtagagaacttcatcacatcaggatgcgac
ctgatcatggttcatccatctgatgcagacgcacttgagacagtgtgccaggaagctctt
gatgcaggaatcaaggtaatgtgctgggatgatccaatggagaataccactgcaaactgg
attcttgacaacactgcacttggtaatgaaatcggaaaaacagctgctgcattcatcaac
gagcattacacagcagacaagccggcagaagtttgcgtaatcggcaagccgtctacaaag
gttctgttagagagagcaaatggtatcaaagaaggtctggaaaagaactgcgacaaagga
aactacgagatcgtagcagaggttgacggactggaagcaaacgaggcacagtctaacgtt
gagaccgttcttcaggctcatcctgactgctctgtattcgtaggagttggcgcaggcgct
atgatcggatcaaatgaagcattacttcagaaattcggcggagctggcaagattccggaa
aatgtaggcgttatcacgacagacgttactcctcagcagttagaatcccttaaggctgga
gatgaggctgtaagagctattatcggatttgaaggatccagtttagacacagctacagct
tgtatgaaaatgtatgagagaatcttagatggagaagatttctcaggcgacaatcataat
gttcagagacctacgatggaaatcaacctggacaacattgacgacatcatgaagggaatg
taa
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