Clostridium scindens: HDCHBGLK_00886
Help
Entry
HDCHBGLK_00886 CDS
T06591
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
csci
Clostridium scindens
Pathway
csci00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HDCHBGLK_00886 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csci01007
]
HDCHBGLK_00886 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csci03016
]
HDCHBGLK_00886 (lysS)
Enzymes [BR:
csci01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HDCHBGLK_00886 (lysS)
Amino acid related enzymes [BR:
csci01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HDCHBGLK_00886 (lysS)
Transfer RNA biogenesis [BR:
csci03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HDCHBGLK_00886 (lysS)
Prokaryotic type
Other AARSs
HDCHBGLK_00886 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_bind
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QBF73512
UniProt:
A0A494WGT9
LinkDB
All DBs
Position
complement(848330..850282)
Genome browser
AA seq
650 aa
AA seq
DB search
MAEQEKKVQEPDLNQLRKVRREKLADLQANGKDPFLITKYDVTAHAAEIKDNYETMEGKQ
VSVAGRIMQKRVMGKASFCNILDQSGNIQSYVARDSVGEDSYKDFKKLDIGDIVGIEGEV
FKTKTGEISIHASAVNLLSKSLQILPEKYHGLTNTDMRYRQRYVDLIMNTESRDTFIKRS
RIVSAIRRYLDGQGFLEVETPMLVSNAGGAAARPFETHFNALDEDFKLRISLELYLKRLI
VGGLERVYEIGRVFRNEGLDTRHNPEFTLMELYQAYTDYNGMMDLTENLYRHVAQEVLGT
TIITYNGVEMDLGKPFERITMIDAVKKYAGVDWNEVSTLEEARALADKHHVEYEDRHKKG
DILSLFFEEFAEEHLIQPTFVMDHPIEISPLTKKKPEDPNYVERFEFFMNGWEMANAYSE
LNDPIDQRERFKAQEELLAQGDEEANTTDEDFLNALEIGMPPTGGIGFGIDRMCMLMTDS
AAIRDVLLFPTMKSMGTAKNEANNAAQSAPVEKTVEKAIAEVKETYDFSNVEVEPLFKDM
VDFDTFSKSDFRAVKVKECEAVPKSKKLLKFVLDDGSGEDRVILSGIHDYYEPEFLVGKT
LLAITNLPPRKMMGIDSCGMIISATHLVEGKEGLNVLILDDKIPAGAKLY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaacaggagaagaaagtacaggaaccagatttaaaccagttaagaaaggtccgt
cgcgagaaactggcagatcttcaggcaaatggaaaagatccattcctgattacaaagtat
gacgtgaccgctcacgcagcagagatcaaagataactacgaaacgatggaaggaaagcag
gtatccgtagccggacgtatcatgcagaagcgcgtgatgggcaaggcttctttctgcaat
atccttgaccagagcggaaatatccagtcttatgttgcaagagacagcgttggggaggat
tcatataaagacttcaagaaattggatatcggagatatcgtaggaattgaaggagaagtg
ttcaagacgaagactggagagatctctattcacgcgtctgctgtaaacctgttgtccaag
agccttcagattcttccggagaaatatcatggcctgacgaatacggatatgcgctatcgt
cagagatatgtagacttgattatgaacacggaatcaagagatacgtttatcaagcgttcc
agaatcgtaagcgcgatccgcagatatctggatggacaaggcttcctggaagtagagacc
ccgatgctggtaagcaatgcgggcggcgccgctgcaaggccgtttgaaacgcacttcaat
gcactggatgaggacttcaaacttcgcatttctttagagttatacctgaagaggctgatc
gtaggcggacttgagagagtgtatgagattggccgcgtgttccgtaacgagggattggat
accaggcataatccggaatttacattgatggaactgtaccaggcatataccgattataat
ggaatgatggatctgacagagaacctgtaccgccatgtggcgcaggaggtcttaggaacc
accatcatcacctacaatggcgtagagatggatctcggaaagccattcgagagaattacg
atgatagatgcggttaagaaatatgcaggcgttgactggaatgaagtcagcacattggaa
gaagcaagagcgctggcagacaagcatcatgtggagtatgaggacaggcataagaagggc
gacatcttaagcctcttctttgaagagttcgcagaggaacacctgatccagccgacattc
gttatggatcacccaatcgagatctccccgctcaccaagaaaaagccggaagatccgaac
tatgtagagcgtttcgaattcttcatgaatggctgggagatggcaaatgcttactcagaa
cttaatgacccgatcgatcagagagaacgtttcaaggcgcaggaagaactgctggcgcaa
ggcgatgaagaggccaacacgacggacgaagacttcctgaatgcactggagatcggtatg
ccacctacaggcggcataggattcggcattgacagaatgtgcatgctgatgacagattca
gcggccatcagagacgtgctgctattcccgacaatgaagagcatgggcactgcaaagaat
gaagctaacaatgctgcacagtctgctccggttgaaaaaacagtggagaaagcaatcgct
gaagtgaaagaaacatacgatttctctaatgtagaagtggaaccattattcaaagatatg
gttgattttgacacattcagcaagtcagatttccgtgctgtaaaggtaaaagaatgtgaa
gcagttccaaaatctaagaagcttctgaagttcgtattagacgacggaagtggcgaagat
cgtgtgattttaagcggaattcacgattattacgagccagaattcttagtaggaaagaca
ttgcttgcaatcacaaaccttccaccacgtaagatgatgggaattgattcttgcggtatg
atcatctccgctacacaccttgtagaaggaaaagaaggactgaatgttctgatcttggat
gacaagattccggcaggagcaaaactgtactaa
DBGET
integrated database retrieval system
