Clostridium scindens: HDCHBGLK_00932
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Entry
HDCHBGLK_00932 CDS
T06591
Symbol
cmpR_2
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
csci
Clostridium scindens
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csci03000
]
HDCHBGLK_00932 (cmpR_2)
Transcription factors [BR:
csci03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HDCHBGLK_00932 (cmpR_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Phosphonate-bd
PBP_like
NMT1
HTH_24
HTH_5
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QBF73558
UniProt:
A0A494WK23
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Position
895107..895991
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AA seq
294 aa
AA seq
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MLDNRTITFLTVCKEMNYTRAAEKLNISQPAVSQHIQYMEDYYGVRLFRFIGKKLILTDA
GRLLQRSLTAFHNNEIYLKEQLSFINDKKQTLRFGATLTVGDFMIARPLSDFLSKHKGAD
ISVTVANTKELLQKLDSGEIDFAILEGDYPKTLYNHQPYIIDNFIPICGKKYPFAAPPAR
LSDLIGERLILRESGSGTRMILEHMLIENGISLEDFSNVITIGNMNAIKDMVIAGCGITF
LYETAVLKELRSGIIKKLDLADCRIQHEISIVWKRDNLFEDSFKELFEDLFQIC
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaaccgtaccattacatttttaactgtatgcaaggaaatgaattatacccgg
gctgccgagaagcttaatatttcccagcctgccgtatcccagcacatccagtatatggag
gactattatggcgtcaggctttttcgcttcatcggcaagaaactgatcctgacggatgca
ggaagactgcttcagcgttcccttacagccttccacaataacgagatctacctgaaggag
cagctgtccttcatcaacgataagaaacagacgctgcggttcggcgctacgctgacggtg
ggcgattttatgatcgcaaggcctctgtcagactttctctccaaacataagggcgctgat
atctccgtcactgtggcaaacactaaggagctgctgcagaagttagattccggggaaatc
gactttgccatcctggagggggattaccccaagaccctttataaccatcagccttatatt
atcgataactttattcccatttgcggaaaaaaatatccgtttgccgcaccgcctgcccgg
ctgtccgatctgattggcgagcgcctgatcttgcgcgaatccggctccggcaccaggatg
atcctggagcacatgctgattgaaaatggcattagcctggaggatttctccaatgtaatt
accatcgggaatatgaacgctatcaaggatatggtcattgccggctgcggcattaccttc
ctttatgaaaccgctgtgctaaaggaactgcgatcaggaataataaagaagctggacttg
gctgactgccgcatccagcatgagatttcaatcgtctggaaaagggacaatctgttcgaa
gactcgttcaaagaactttttgaagatttattccaaatttgttaa
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