Clostridium scindens: HDCHBGLK_00948
Help
Entry
HDCHBGLK_00948 CDS
T06591
Symbol
ykoC
Name
(GenBank) Putative HMP/thiamine permease protein YkoC
KO
K16785
energy-coupling factor transport system permease protein
Organism
csci
Clostridium scindens
Pathway
csci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDCHBGLK_00948 (ykoC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csci02000
]
HDCHBGLK_00948 (ykoC)
Transporters [BR:
csci02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
HDCHBGLK_00948 (ykoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CbiQ
DUF5708
Chitin_synth_2
Motif
Other DBs
NCBI-ProteinID:
QBF73574
UniProt:
B0NBR9
LinkDB
All DBs
Position
complement(914766..915521)
Genome browser
AA seq
251 aa
AA seq
DB search
MNQKNKMVSLYPLTKFYLSVVLVIISVAMPGILSKVICFVLINILAGVSGVWLVFIRRVR
NSVGVLFIILLIIQTLFYPSGRVMFSFWIFDAKWEGLLFALKLGFTLMCVGGSLIWFFAV
TKEKDFVMALEKQGMSPKASYVVLSTLQMVPVLKKKSQTIMNAQKARGVETEGNIIVRAK
VFIPTIIPLVLSSIAGTEERALTLEARGFSSKIKPTHLEDIEKTPADTTAIVLITILFIA
AIAGRIMLWVI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaagaataaaatggtttctttatatcctctgacaaagttttatctgtcggtt
gttctggtcattatttctgtcgcaatgcctggaatcctcagcaaagtcatttgttttgtg
ctgatcaatatcttggcgggagttagcggcgtgtggctggtttttatacggcgagtacgg
aattccgtaggggtgctgtttattatccttcttatcatacagacattattttatccaagt
ggaagagtaatgttctctttttggatatttgatgctaaatgggaaggattgctattcgct
ttaaaacttggatttacactgatgtgtgtaggcggcagcctgatctggtttttcgcagtt
acaaaagaaaaagattttgtgatggcattagaaaagcagggaatgagccccaaagcatct
tatgtagtgctgtcgactttacagatggttccggttttaaagaaaaaatcccagacgatc
atgaacgctcagaaggcaagaggtgtggaaacagaaggaaatatcattgtccgtgcgaag
gtgttcatccctacgattattccattagtattgagttcgatagcagggacagaggaacgg
gcgctgaccttggaagccagagggttttcctctaaaatcaagcctacgcatttggaagat
attgaaaagacgccggcagatacaacagcaattgtgcttattaccatattatttatcgcg
gcgatagcagggaggatcatgttatgggttatatag
DBGET
integrated database retrieval system
