Clostridium scindens: HDCHBGLK_01008
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Entry
HDCHBGLK_01008 CDS
T06591
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
csci
Clostridium scindens
Pathway
csci03030
DNA replication
csci03430
Mismatch repair
csci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HDCHBGLK_01008 (dnaX_1)
03430 Mismatch repair
HDCHBGLK_01008 (dnaX_1)
03440 Homologous recombination
HDCHBGLK_01008 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csci03032
]
HDCHBGLK_01008 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
csci03400
]
HDCHBGLK_01008 (dnaX_1)
Enzymes [BR:
csci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HDCHBGLK_01008 (dnaX_1)
DNA replication proteins [BR:
csci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HDCHBGLK_01008 (dnaX_1)
DNA repair and recombination proteins [BR:
csci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HDCHBGLK_01008 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QBF73633
UniProt:
B0NGG6
LinkDB
All DBs
Position
complement(986606..987595)
Genome browser
AA seq
329 aa
AA seq
DB search
MGTFKDVVGHKDIINYIRNAVREDKVSHAYILNGERGAGKKMLANLFAATLLCEKGGPDP
CNECHSCRQAESGNHPDIIKVTHEKPNSISVDDIREQVNNTIMIKPYQGPYKVYIIPQAD
MMTTQAQNALLKTIEEPPEYAVIMLLTENADTLLPTINSRCVMLKLRNIKDTLIKKYLME
TMQVPDYKADMCTAFAQGNMGRAIMLANSEHFNEIRDEAVQLLKYINEMELSEIVQAVSR
ITAYKLEINDYLDIIMIWYRDVLLYKATKDMDKVVFKDQIKYIKERAKRSSYEGIELIIE
SLEKAKARLKANVNFDLVMELLFLTIKEN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtttaaagatgtggttggccacaaagacattattaattatatcaggaatgcg
gtaagagaggacaaggtgtcccacgcttatatattgaatggagagcggggagccggcaag
aagatgctggcgaatctgtttgccgccacattgctgtgcgagaaaggcgggccggatccg
tgcaatgaatgccattcctgcagacaggcagaaagcggcaaccatccggatattataaag
gttacacacgagaagccgaattctattagtgtggacgacatccgggaacaggtgaataat
acgattatgataaagccctaccagggaccatataaggtatacattattccccaggcagat
atgatgacgacccaggcgcagaacgccttgcttaaaacgatcgaggagccgccggaatat
gcggtaatcatgcttcttacagagaatgcggatacgctgctgccgacgattaattccagg
tgcgtaatgctgaaactgcgtaatattaaggataccctgattaagaagtatctgatggag
accatgcaggttccggattataaggcggatatgtgcactgcatttgcccagggaaatatg
ggacgtgccattatgctggcgaattccgaacattttaatgagatccgtgatgaggcggtg
cagctgctgaagtacatcaatgagatggagttaagcgagatcgtgcaggcggtaagccgg
atcacggcatataagctggaaatcaatgactatctggatattatcatgatatggtatcgg
gatgtcttattatataaagcaaccaaggatatggataaggtcgtattcaaagaccagata
aaatatatcaaagaacgggctaagagaagttcctatgaaggaatcgagcttatcatagaa
agcctggaaaaagccaaagccagattaaaggccaatgtaaactttgatctggtaatggaa
ctgttgttcctgacaataaaggagaattaa
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