Clostridium scindens: HDCHBGLK_01034
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Entry
HDCHBGLK_01034 CDS
T06591
Symbol
tadA_2
Name
(GenBank) tRNA-specific adenosine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
csci
Clostridium scindens
Pathway
csci00240
Pyrimidine metabolism
csci01100
Metabolic pathways
csci01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HDCHBGLK_01034 (tadA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csci02044
]
HDCHBGLK_01034 (tadA_2)
Enzymes [BR:
csci01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
HDCHBGLK_01034 (tadA_2)
Secretion system [BR:
csci02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
HDCHBGLK_01034 (tadA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC4_like
SNAD4
APOBEC_N
Motif
Other DBs
NCBI-ProteinID:
QBF73659
UniProt:
A0A494WIV7
LinkDB
All DBs
Position
complement(1008773..1009261)
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AA seq
162 aa
AA seq
DB search
MGSKRKDYISWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPMGCSDDE
FPWVREGDDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKE
VIYDCNKYEDTSSVKASMRMFDAAGVNYHQYHRTQREITIRL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaagaggaaagactatatcagttgggacgagtactttatgggtgtagccatg
ttatccggcatgcgttccaaagacccgaatacgcaggttggctgctgtatcgtaagccag
gataacaagattctgtccatgggatataatggactgccgatgggatgctctgatgatgaa
ttcccatgggtgagggaaggggacgacccgttggagaccaaatatgtatatacggtgcac
agcgaattgaatgcgatccttaactaccggggcggaagcctggaaggagcgaaactgtat
gtgtctctctttccatgcaatgaatgcgccaaggcgatcattcaaagcgggattaaggaa
gtgatctatgattgcaataaatatgaagatacgtcctctgtgaaggcatccatgcggatg
tttgatgcggcaggcgtgaattaccatcagtaccaccgtacgcaaagagagattaccatc
aggctgtaa
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