Clostridium scindens: HDCHBGLK_01127
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Entry
HDCHBGLK_01127 CDS
T06591
Name
(GenBank) hypothetical protein
Organism
csci
Clostridium scindens
Pathway
csci03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HDCHBGLK_01127
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DEAD
UvrD-helicase
AAA_19
ATPase
HigB-like_toxin
Motif
Other DBs
NCBI-ProteinID:
QBF73752
UniProt:
B0NGI1
LinkDB
All DBs
Position
1098214..1100022
Genome browser
AA seq
602 aa
AA seq
DB search
MKPEIKKLLILNLPYLLFVWLFDKVGAAVRLSPGADASAKLLHLGDGFTAAFSSIAPSFH
PIDLLIGIAGAVIVRLIIYTKGKNAKKYRRGTEYGSARWGGTDDIKPYTDPVFENNIPLT
QTERLTMNSRPKQPKYARNKNILVIGGSGSGKTRFFVKPSLMQCTSKDFPTSYIVTDPKG
TLILETGKMLQRYKYRIKVLNTINFKKSMKYNPFAYLRSEKDILKLVNTIIANTKGDGEK
SGEDFWVKAEKLYYTALIGYIWYEAPEDEKNFTTLLEMINASEAREDDEDFQNPVDLMFE
RLEEKDPEHFAVKQYRKYKLAAGKTAKSILISCGARLAPFDIKELRELMETDEMELDTIG
DRKTALFVIISDTDDTFNFVVSILYTQLFNLLCDKADDEYGGRLPVHVRCLLDEFANIGQ
IPKFEKLIATIRSREISASIILQSQSQLKAIYKDNADTIVGNCDTTLFLGGKEKTTLKEI
SEILGKETIDSFNTSETRGRELSHGLNYQKLGKQLMTEDEIAVMDGGKCILQLRGVRPFF
SDKFDITKHPKYKYLSDADPKNAFDMEKHLKRRPAIVKPDEVFDYYEIDAADLQEDADHE
ET
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggaaatcaagaagctgcttatcttaaatctcccgtatctgctctttgtctgg
ctctttgataaagtgggcgcggctgtccggctctcccccggcgcggacgcgagcgcaaag
ctgctacatcttggggacggttttaccgccgccttttccagtatcgcgccgagcttccac
ccgatagatttacttatcggcattgcgggggcggtcattgtccggctgattatctacacc
aaaggcaagaacgcgaagaaataccgccgcgggacagaatacggttcggcgcgttggggc
gggactgacgacataaagccgtacaccgacccggtatttgagaacaatatcccgcttacg
cagacggaacggctcaccatgaacagccgcccgaagcagccgaaatacgcaagaaacaaa
aatatccttgtaatcggcggttccggcagcggcaagacccggttctttgtgaaaccgtcg
ctcatgcaatgtacgtcaaaggattttccaacgtcgtatatcgtcactgacccgaaagga
acactgattttggaaaccgggaaaatgttacagcggtacaaataccgtatcaaagtgcta
aatacgattaacttcaaaaaatccatgaaatacaatccctttgcctatctgcggagcgaa
aaggacattttgaagttagtcaataccattatcgccaacaccaaaggcgacggggaaaaa
tccggcgaggatttctgggtgaaagcggaaaagctctactacaccgcgctaatcggctac
atctggtatgaagccccggaggacgagaagaacttcacgacgctgcttgagatgataaat
gcgtcggaagcccgcgaggacgacgaggatttccagaacccggttgacctcatgtttgaa
cgtctggaagaaaaagacccggagcatttcgctgtcaagcagtaccgcaaatataaactt
gcggcgggcaagaccgcaaaaagcatacttatctcatgcggcgcgaggttagccccattc
gacattaaggagctgcgggagcttatggaaaccgacgaaatggagcttgacaccataggc
gacagaaagaccgcccttttcgtcatcatcagcgacaccgacgacacttttaactttgtc
gtttcaatcctttacacacagctattcaacttgctttgtgacaaggcagatgatgaatac
ggcgggcggcttcccgtccatgttaggtgcttacttgatgaatttgcgaatatcgggcag
ataccaaagtttgaaaagctcattgcaacgatacggagccgggaaatatccgcgtcaatc
atcttgcagagccagtcacagctaaaggcaatctacaaggacaacgccgataccatagtc
ggcaactgcgacaccacgcttttcttgggcggcaaggagaaaaccacccttaaagaaata
tcggaaattttaggaaaagaaacgatagacagctttaacacttccgaaacaagggggcgg
gagctttcgcatgggctgaactatcagaaattgggaaagcagcttatgacggaagatgaa
attgcagtcatggacggagggaaatgtatcttgcagctacgaggggtgcgcccgttcttt
tcggacaaattcgacataacgaagcacccgaaatacaagtacctgtccgacgcagacccg
aagaacgcctttgacatggaaaagcaccttaaacgccgccccgccattgtcaagcccgac
gaggtttttgactattacgagattgacgcggcagacttacaggaggacgcagaccatgag
gaaacgtag
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